Gene BLD_1539 details

Gene Information

• Locus tag: BLD_1539
• Symbol: mdlB4
• ID: 6364354
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 1825168
• End bp: 1827078
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642680730
• Product: multidrug ABC transporter ATPase/permease
• Protein accession: YP_001955482
• Protein GI: 189440401
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGTCG ATCCGGGAAT CAATACCAGC GCAAGCAATC TCAAATGGGT GCTGCCATAC 
TGCAAACCAG ACCTGCCCCG CGTGGTAGGC GCGCTTCTAC TGTTCATCGC AAATAACACG 
ATGGCCCTGA CCATTCCGAT TCTGTCCGGT ATCATCGTGG ACCGCGTCAT CGTCGGCGGA 
CATGCCGACG AACTGCCACG TCTGTGTGGA CTGATGATCC TCATGACCAT CATCCGCGTG 
GGCGCGCGAT ACGGCTACCA GATGTGGATG GAGCGTTTCG GCCAGAACTC GGTCTACCGC 
CTCGTCTCCG ACGAATACGA GAAGCTGCAC GAGCTCGACT TCACGTATTT CAACCACACA 
CGCACCGGCG ACATCATGAG CCGCCTGACC TCCGACACCG ACGCGATCCG CCACTGCCTG 
AGTTGGGTGA GCTATCAGAT TGCCGACTGC GTGGTCATGT TCGTGGGCGC CCTGTGCGTG 
ATGTTCGCCA TCGATTGGCG ACTCGCGCTC GTCCTGGCCT GCGTCACGCC GTTCATTTTT 
GTGCTCACGC GCGGCCTGTC CACGCACGCC CACCCGCTGT TCTTCGCCAT CCGCAACTCG 
CTGGCCTCCC TCAACTCCAT GGTCGAAGAG AACATCGAGG GCAACCGTGT GGTCAAGGCA 
TTCGTGCGCG AACCGTACGA GACCGAAAAG TTCGACGAGC ACAACGACGA TTACATGCAG 
TGCAACATGG CCTTGGCCTA CAACTCGCGC AAGTACATGC CGTGGCTGGA CGGCCTCGGC 
TTCTCGCTGC AGCTCATCAC CCTCGGCCTC GGCGGCTTTC TGGTCATCAA GGGCTACATG 
ACCCTCGGCA ATCTGGTGAG TTTCAACTCC TTCCTGTGGA TGATCGACGG CCCGGTGCGC 
CAGTCCGGCT GGCTGATCAA CGACTGGCAG CGATTCAACG CCAGCTGCAT CAAAATCCGC 
AAGCTGCTCA CCGAACAGCC GCGCATCGTG GAGAAGCCCG ACGCGGTCGA AGCCGTCAAG 
CAGGCGGTCA CGATCGTCGA GCAAGTCAAG CACGATGATG AGGCTACCGG GGCTACCGGA 
GCGCCCGTGG CTTCCGGAAC ATCCGGTGCC CAGCAGTCCA CCGAACGCAA GTCCTGCCCG 
CTGCACATCA AGGGCGACAT CCGCTTCGAC CACGTCAGCT TCGCCTTCCC GGACGACCCG 
GAGACCCCGA TCCTCAAGGA CCTCGACTTC ACCGTGCCCG CCGGCTCCAA GCTCGGCATC 
CTCGGCGAAA CCGGCGCGGG CAAGTCCACG CTCGTCAGCC TCATCTCCCG CTTCTACGAC 
CCGACCGTTG GCCATGTGCT TATCGACGGC ATCGACGCAC GCGACTGGCC GCTGGCCACC 
TTGCGCTCGC AGGTGTGCAT CGTGGCGCAG GATACCTTCC TGTTCTCCGA CACCATCGGC 
GGCAACATCG GTTTTGGTGC CAGCGGTGAT AGCGACGACC GATATATCCA GAAAATGGCC 
CAGATCGCCG GCGCGGACAA TTTCATCAGG TCGATGCCAC AGGGTTATGA CACCGTCGTG 
GGCGAACGCG GCGTGGGCCT GTCCGGCGGG CAGAAGCAGC GCCTGTCGCT GGCCCGCGCG 
CTCGCGGACA ATCCGTCGAT CCTGATTATG GACGATACGA CCTCGGCCGT CGATATGGAG 
ACCGAGGCGG AGATCCAGAA GCACCTCAAG GAGATGGACG GCGGCAAGAC CATCGTCGCC 
ATCGCCCACC GCATCTCGTC GGTCAAGGAT TCCGACCTGA TTCTGGTGCT CGAGCACGGA 
CGTATCGTCG AACGCGGCAC CCACGCCGAA CTCGTGGCCG CACACGGCCG CTACTGGGAC 
ATCTACCACA AGCAGCTCGG ACTCCAGTCC GGCGTCGCAC AAGGTTTTTA G 

 

Protein sequence

MYVDPGINTS ASNLKWVLPY CKPDLPRVVG ALLLFIANNT MALTIPILSG IIVDRVIVGG 
HADELPRLCG LMILMTIIRV GARYGYQMWM ERFGQNSVYR LVSDEYEKLH ELDFTYFNHT 
RTGDIMSRLT SDTDAIRHCL SWVSYQIADC VVMFVGALCV MFAIDWRLAL VLACVTPFIF 
VLTRGLSTHA HPLFFAIRNS LASLNSMVEE NIEGNRVVKA FVREPYETEK FDEHNDDYMQ 
CNMALAYNSR KYMPWLDGLG FSLQLITLGL GGFLVIKGYM TLGNLVSFNS FLWMIDGPVR 
QSGWLINDWQ RFNASCIKIR KLLTEQPRIV EKPDAVEAVK QAVTIVEQVK HDDEATGATG 
APVASGTSGA QQSTERKSCP LHIKGDIRFD HVSFAFPDDP ETPILKDLDF TVPAGSKLGI 
LGETGAGKST LVSLISRFYD PTVGHVLIDG IDARDWPLAT LRSQVCIVAQ DTFLFSDTIG 
GNIGFGASGD SDDRYIQKMA QIAGADNFIR SMPQGYDTVV GERGVGLSGG QKQRLSLARA 
LADNPSILIM DDTTSAVDME TEAEIQKHLK EMDGGKTIVA IAHRISSVKD SDLILVLEHG 
RIVERGTHAE LVAAHGRYWD IYHKQLGLQS GVAQGF