Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1538 |
Symbol | galA3 |
ID | 6364353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1823007 |
End bp | 1824416 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642680729 |
Product | alpha-galactosidase |
Protein accession | YP_001955481 |
Protein GI | 189440400 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGATC TTCCGCAGAG CCTTCCTCAG GCATGGCGTC CGCCGATGGG CTGGAACAGC TGGGATTCCT ATGGCACGAC CCTCACCGAA GACGAGCTGC TGGCCAACGC GCGGTTCATG GCTGAACACC TGAAAAACGC CGGCTGGGAT ACGCTGGTCA TCGACATCGA CTGGTACGAC CCGACCGCCC GCGCACATGG TTACAACGAC AACGCGCCGC TGATTCTCGA CGAATACGGC CGTCAGCTGC CTGACCCGGT GCGTTTCCCG AGTGCTGCCG GCGGCAAGGG ATTCGGCCCG CTCGCCGCCG CCGTCCACGA ACTGGGCTTG AAGCTTGGCA TGCACATGAT GCGCGGCATC CCGCGTATCG CCGTGGACAA GAACCTGCCC GTATACGGCA CCAACTACAC CGCCAAGGAC GTGGCCGACC TCGACCACGT GTGCAAGTGG AATCCGGACA ACTACGGCCT GAACCAATCC CACCCGGGCG CGCAGGCCTG GTATGACGCG CAGCTCGACC TGTTCGCCTC CTGGGGCCTC GACTTCCTCA AGGTCGACGA CATGCAGACC CCGTTCCACT CCGACGAAAT CGCCGCCTAT CATCGCGCCA TCGCCAAAGC CGAAGCCAAA TACGGCCGTT CGATTGACCT GTCTCTCTCG CCCGGCGGCT GGGTGGCGAC GAGCTACGTC GACTTCCTGC GCGAGAACGC CCAAATGTGG CGTATTTCCG ACGATCTGTG GGACCGTTGG GAAGACATCT ACCAGCAGTT CGCCCGCCTG GCCCGCTGGG CGCCGTTCCA GACCACCGGC CACTGGGCCG ACGCCGACAT GGTGCCGTTC GGGCACATAG GCCTGCGCGC CGAACGCGGC GACGACCGCC AATCCCGCCT TACGCTGGAC GAGCAGAAGA CACTGCTGGC CCTATGGTGC ATGGGGCGTA GCCCGCTTAT GGTCGGCGGC GATCTGCCCA CCAGCAACAG CGACGCCATC GCGCTGCTGC AGAATCCCGC GTTGCGTGAG GTGCTTGCCG GCTCCACCAA TAACCGCGAG ACCGTGCGCG AACGGATTTT TGGCAAATGG TGGGATGAGA GCACCTACCG TGGCGAGTTC ATCGTCTGGT CCGCCGACGC AGCCGATTGG GCCGATGGCA CACGTTCCGC GCATCACGGC GGCCATTACG CCGCGCTGTT CTGGACCGGC AGCGACACAT ACGAGATCGG CCGCAACATC CAGCTCCAAT CCATTGTGGG GCTTGACGCC CGCAATGACG ATTGGACACT CGCCGATCTG TATGCCGACG CGCCGGGCGA GCCCGCCGAC GTGCGTCTTG AAGGCGTGGG TGCCGACCGC GTCATCACCG GCACGATTCC GCCGCACGGC GTGCTCTGGG TGGCCCTGGA CCGACGCTGA
|
Protein sequence | MTDLPQSLPQ AWRPPMGWNS WDSYGTTLTE DELLANARFM AEHLKNAGWD TLVIDIDWYD PTARAHGYND NAPLILDEYG RQLPDPVRFP SAAGGKGFGP LAAAVHELGL KLGMHMMRGI PRIAVDKNLP VYGTNYTAKD VADLDHVCKW NPDNYGLNQS HPGAQAWYDA QLDLFASWGL DFLKVDDMQT PFHSDEIAAY HRAIAKAEAK YGRSIDLSLS PGGWVATSYV DFLRENAQMW RISDDLWDRW EDIYQQFARL ARWAPFQTTG HWADADMVPF GHIGLRAERG DDRQSRLTLD EQKTLLALWC MGRSPLMVGG DLPTSNSDAI ALLQNPALRE VLAGSTNNRE TVRERIFGKW WDESTYRGEF IVWSADAADW ADGTRSAHHG GHYAALFWTG SDTYEIGRNI QLQSIVGLDA RNDDWTLADL YADAPGEPAD VRLEGVGADR VITGTIPPHG VLWVALDRR
|
| |