| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1518 |
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| Symbol | |
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| ID | 6363778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1789759 |
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| End bp | 1791255 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642680708 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001955461 |
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| Protein GI | 189440380 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGG ATGAACTTAT GCAAGTGCTG CAGGCCGGTG AATCATCTAT GGTCGAGTTC
AAGCGCTGCA GCGAATTGCC TCATACGGAT ACTTTTGAGA CTGTATGCTC ATTCGCCAAT
CGTTCTGGTG GCAGCATTTA TCTTGGCGTT GACGATGACG GTCAAGTGCT CGGCGTCGAT
TCTAAGCGCG TTAGTGAGAT AGAGCGCAAC GTTGTCAACG TAGTGTCTAA TCGTAAGATG
TTCGAACCGG CTCCAATGGT GGAAACGGAA CATATCGAGT ACGACGAACG GATTATTGTT
CGTATTTGGG TAGCTCCGAG TTCTTCGGTT GTGCGGTTCA AGGGCGCAGT GTTTGATCGC
ATTGCTGATG TGGATACACA CATCGAAAGC GATATCCAGA TTAGTCAAAT GTATATTCGC
AAGCAGAACT ACTATTCCGA ACGGCGAATT TTCCGTTACG TGACTCCGTT TGATTTGCGT
CCTGAGCTGA TTGCGCGAAT GCGGCAGCTG GCGGTCGCTC AGCGAGCTGG GCACCCTTGG
GGAACTATGT CTGACGAAGA ACTGTTCCGC AGCGCCAAGC TATACGATCG TGATTACACG
ACCGGCGAAG AGGGCTTTAA TCTTGCTGCA GTGCTGCTCT TGGGCAAGGA TGAAGTCATT
TCCTCGGTTT GCCCAGCGTA TATTACTGAT GCCGTGGTTC GGCGAGACAA TATTGACCGA
TACGATGACC GACTTATGGT GCGGACCAAC TTGTTCGATT CGTACGAGCA ACTCCGTGAA
TTTACTGAGC GGAATCTGCC TGACCGCTTT GTGTTAAAGG GCGATAAGCG AGTGAGCCCG
CGTACGATGA TCGCCCGTGA ATTGGTGGCA AACAGCCTCA TGCATCGGGA GTATTCCAGT
CCGGTGGTGG CGCGTGTCAC CATTGATAAT GAATCCATCC GGACGGTTAA TGCTTCGCGC
TCATTCTTTG AAGGTCGAAT GAAGCTGGGC GAGTTCACGC CAATGCCAAA GAATCCGATT
ATCGCTAATG TGTTTGTGCA GACCGGCATA GCCGAGCAGC CGGGTAGCGG ACTGCGGAAT
CTGATAAGAG CGTCCCGGCA ATATACTGAG CGAGAGCCTG AGTTCCGCGA TGGTGACATA
TTCGAGGCGA CGATTCCTAT TGTTCCTGCG CTGAAGACCG TTGATGGTTC TGGTTTTGCT
AGCGTGAGAT CTGTAGTTGA GAAAGATGCC GAAGAGGGTG CGAGGCTCAT TGGCGGGGAA
CGTGTGGATG GTAAGAAAGC AGATGCAACC GCATCGGGTG AAATTGATTC GCGGGCAGCG
ATGCTGTCGG CGATGAATCG ACGCTTGACA GAGGTTGACT ATGTGACTGT ACCTGAACTC
GCCAAGATAA CAGAGCTCGA TAACAGAACA GTCCGCAAAT TCCTAAACGG TTTAGTTGCG
CAAGGAAAGC TGATTGCTGA AGGCAACACG CGTGGTCGGC GTTATCGGAA GGGATAG
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| Protein sequence | MTQDELMQVL QAGESSMVEF KRCSELPHTD TFETVCSFAN RSGGSIYLGV DDDGQVLGVD
SKRVSEIERN VVNVVSNRKM FEPAPMVETE HIEYDERIIV RIWVAPSSSV VRFKGAVFDR
IADVDTHIES DIQISQMYIR KQNYYSERRI FRYVTPFDLR PELIARMRQL AVAQRAGHPW
GTMSDEELFR SAKLYDRDYT TGEEGFNLAA VLLLGKDEVI SSVCPAYITD AVVRRDNIDR
YDDRLMVRTN LFDSYEQLRE FTERNLPDRF VLKGDKRVSP RTMIARELVA NSLMHREYSS
PVVARVTIDN ESIRTVNASR SFFEGRMKLG EFTPMPKNPI IANVFVQTGI AEQPGSGLRN
LIRASRQYTE REPEFRDGDI FEATIPIVPA LKTVDGSGFA SVRSVVEKDA EEGARLIGGE
RVDGKKADAT ASGEIDSRAA MLSAMNRRLT EVDYVTVPEL AKITELDNRT VRKFLNGLVA
QGKLIAEGNT RGRRYRKG
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