Gene BLD_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1517 
SymbolansP2 
ID6363777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1787896 
End bp1789419 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content60% 
IMG OID642680707 
Productgamma-aminobutyrate permease 
Protein accessionYP_001955460 
Protein GI189440379 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATA CGAATGTGAA TGGTGGTACA CAGCAGGCTA CGGGCAAACT CAAGTCTGTC 
GAAAGCCTGG ACCAGACCAA CGAGATGGAG CGTGGCCTGA GCAATCGCCA CGTACAGTTC
ATCGCCATTG GCGGCACCAT CGGCACCGGC CTGTTCCTGG GCTCGGGCAA GTCAATCTCG
CTAACCGGCC CCTCGATCAT CTTCGTGTAC ATTCTGGTCG GCGTCATCAT GTTCTTCCTG
ATGCGCGCCA TCGGCGAAAT GATGTACCGT GACCCCAGCC AGCACACCTT CATCAATTTC
ATCACCCGTT ACCTTGGCAA CGGGTGGGGG CATTTCGCCG GCTGGACGTA TTGGGCCGCG
CTCGTGCTGC TGGGCATGAC CGAGATCACG GCCGTCTCCA CGTACTTCAT CACCTTCTTC
GACACGTTCG GCATCGACCT GACCCATTGG AAATGGCTGA TCGAGCTGTG TTTCCTGGTG
TCGCTGGTCT CCATCAACCT GATTGCCGTC AAGGTGTTCG GCGAGGTGGA ATTCTGGTTC
TCGATGATCA AGATCACGCT GATTTGCGCG ATGATCGCCA CCGCCGTGGT CATGATCGTG
ATCGGCTACC ATTACCCAGC CGTGCAGATT CACGGCGTGG ACCACGTGAG CCCGGCCGGC
CACGCCGGAT TCGACAACCT GTTCGCCATC TTCTCGTTCG CGCCGAACGG TTGGATGGCC
TTCCTCATGA GCTTCCAGAT GGTGTTCTTC GCCTACGAGA TGATTGAATT CGTGGGCGTC
ACCGTCTCCG AGACCAAGAA TCCGCGCAAG GTGCTGCCCA AGGCCATCAA CGAGATTATC
GTGCGCGTGC TCATCTTCTA TGTGGGCGCA CTGGTGGCCA TCATGTGCAT CGTGCCGTGG
ACCTCGTTCA AGCCGAACGA GGACGGCTCC TTTGCCTCCC CGTTCATTAT GGTGTTCCAG
TACGCCGGGC TGAATTGGGC GTCCGCGCTG GTGTTCTTCG TGGTGATCAC CGCCGCATCT
TCCGCGCTGA ACTCGCTGCT GTACTCGGCT GGCCGCCACC TGTACCAGCT GTCCGAGGTG
TCGCCGAACC CGACGCTCAA CAAGCTCGGC AAGGTGTCCG ACCGCAAGGT GCCGGCCCGC
GCCATCCTGG TGTCCGCGGC GCTGATCCTG CTGTCGCCGA TCGTCAACGC CATCCCCGGC
ATCTCGGGGG CGTTCGTGCT GTTCTCGTCC GCCAGCTCCG CGGTGTTCCT GTTCATCTAC
ATCCTGACGC TGCTGGCGCA TCGCAGGTAT CGCCGTTCCG CCGATTTCAT CGCGGACGGG
TTCGTCATGC CCGCGTGGAA GGTGCTCAAT ACGGTGGCAA TCGTGTTCTT CGTGTTCATC
TACCTGACGC TGTTCCTGGC GGACGATACG CGCAATTCCG CGATTGCCGG CCTGGTGTGG
CTTGTGGGCT TCGGTGGATT CTCTATGCTG CGCGAACGCT ACCGTAGCCG CGATTTGAAG
GCCGCACTGG AACACAAGGA GTGA
 
Protein sequence
MADTNVNGGT QQATGKLKSV ESLDQTNEME RGLSNRHVQF IAIGGTIGTG LFLGSGKSIS 
LTGPSIIFVY ILVGVIMFFL MRAIGEMMYR DPSQHTFINF ITRYLGNGWG HFAGWTYWAA
LVLLGMTEIT AVSTYFITFF DTFGIDLTHW KWLIELCFLV SLVSINLIAV KVFGEVEFWF
SMIKITLICA MIATAVVMIV IGYHYPAVQI HGVDHVSPAG HAGFDNLFAI FSFAPNGWMA
FLMSFQMVFF AYEMIEFVGV TVSETKNPRK VLPKAINEII VRVLIFYVGA LVAIMCIVPW
TSFKPNEDGS FASPFIMVFQ YAGLNWASAL VFFVVITAAS SALNSLLYSA GRHLYQLSEV
SPNPTLNKLG KVSDRKVPAR AILVSAALIL LSPIVNAIPG ISGAFVLFSS ASSAVFLFIY
ILTLLAHRRY RRSADFIADG FVMPAWKVLN TVAIVFFVFI YLTLFLADDT RNSAIAGLVW
LVGFGGFSML RERYRSRDLK AALEHKE