Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1490 |
Symbol | |
ID | 6363727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1741494 |
End bp | 1742822 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642680677 |
Product | MalE-type ABC sugar transport system periplasmic component |
Protein accession | YP_001955433 |
Protein GI | 189440352 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.095095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGGA TTATGCGTAA CAGCGGCGCG GCGCTTGCTG CGATATTTAT CGCTGGAAGT CTGACTGCAT GTGGTCCCGG CTCGGCAAGT AGCTCACGAA GTGATACAAA TCCTACTGAG GTCAGCACTG ATTTAGGTAA TAAAAAATAT GAGCTGACTT TGTGGGATGG AGCGGGTCTG AAGGCTGTAG ATGAGGCGCT GATTGCCGGG TTCGAAGCGA AATACCCAAA CATCACCATC ACGGGACAAT ATGATCCGGA TAATGTCTCT GGACAAAATG GCCCGCGTGT GATTTCAGCA AAAGATGCGC CGGATATCGC CCGCGTCACC GACATGAATT CAGCGGTTCG TGGCAACCAT TTGGTGTCTT TAGAGGCATA TGTGGATGCG TACGGCTGGG ATGTTCCCGA TTCGCAGACT GAATTGTATC GAGTGGATTC AAATGGCAAG CTCGGCAGCG GTGATTTGTA CGCATTGCCG AACTCCTATT CGGTGACTGG CATTTATTTC AATACCAAGC TTGCCGAGCA GCTAGGTATT GATGCAGCTC CTACCTCTGT CGAGGAGTTT GAGGCGGATA TGCAGACAGC CAAGGATGCC GGCATACTGC CGATGATGAC ATATGCCAAG GATGGCGGTA CCTCTTTTGT CTTTCAGGCG TTAATGGCTA ATAACAGTTC TGCGGAAGAT GTGCAGAATT GGATTTTGCA GAAATCTGGT ACCTTCGACA ATCAGGCGGC GCAGGACGCT GCGTCCACCT TGCAGGATTG GAATAACAAG GGATATATGC CTGAAGGTGT TAACGCAGTG GATGCCTCTA CTGCTCTGAG CAGGTTCTGC AATGGTGAAG GACTATTTTT CCCGAGCGGT AATTGGAATC TGGATACTGT GGCCAAAGCG CTGGGTGATG ATGTTCAGTT CTTTGCTTTC CCGGGTGCCA CCAGTGAAGA TGAGCCGAAC GTTGCTGCTA ATGCAGGTGC ATTTTATGGT ATTCCGGTGA ATGCTAAGAA CCGTGATGCT GCTGCGGCGT TCCTCGATTA TACGCAAAGT GCCGAAGCGC AACAGATTAT TGTTGACAAT TCTGGCTATT TGCCAAAATC ATCTACTTTG GATCTCAAGG CGAATAGCGC ATTGCAGCAG AGTATGTTTG ATGCCTATGC CGACGTGCTG ACGAGCGGTC ATACTAGCGA TTTCATTAAT AATGCTACTG CGGGAATGCA GTCAAGTGGG CTAATCCCTA ACTTCCAGTT ACTGCTGGAT AACAGCATCA CGCCTCAGGA ATTCACAAAG AATGTGCAGG CGCAATATGA CAAAGAAGCG AAGCAGTAG
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Protein sequence | MNRIMRNSGA ALAAIFIAGS LTACGPGSAS SSRSDTNPTE VSTDLGNKKY ELTLWDGAGL KAVDEALIAG FEAKYPNITI TGQYDPDNVS GQNGPRVISA KDAPDIARVT DMNSAVRGNH LVSLEAYVDA YGWDVPDSQT ELYRVDSNGK LGSGDLYALP NSYSVTGIYF NTKLAEQLGI DAAPTSVEEF EADMQTAKDA GILPMMTYAK DGGTSFVFQA LMANNSSAED VQNWILQKSG TFDNQAAQDA ASTLQDWNNK GYMPEGVNAV DASTALSRFC NGEGLFFPSG NWNLDTVAKA LGDDVQFFAF PGATSEDEPN VAANAGAFYG IPVNAKNRDA AAAFLDYTQS AEAQQIIVDN SGYLPKSSTL DLKANSALQQ SMFDAYADVL TSGHTSDFIN NATAGMQSSG LIPNFQLLLD NSITPQEFTK NVQAQYDKEA KQ
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