| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1473 |
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| Symbol | spoU4 |
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| ID | 6363243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1717977 |
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| End bp | 1718969 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642680660 |
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| Product | rRNA methylase |
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| Protein accession | YP_001955416 |
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| Protein GI | 189440335 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATCA AAAAAGGACC GACCAAGGGG TCGGGTGGCA AGCATCGCAA CAAACTGAAG
GGCTACGGCC CCACTCCCAA GGCCGAGGAC CGCGTCTATC ACAAGGCGTA CAAGGCCAAG
AAAGCGGCCG AACGTCGGCA GATGGCCGAC CCGCGTCTGG CAGCCCGCCG TCGAGTGGAC
AAGTTCGCTT CGGCGGATAC TTCGGATCTG GTGTACGGCC GTAATTCCGT GCTGGAAGCA
CTGCGCGTAG GCGTACCTTC TTCCACGCTG TACATCATGT CTCGTATTGA ACATGACGAT
CGTACTCGCG AAATCGTGAA AATCGCTGGT ATGAACGGCC TGCACATGCT GGAGGCCGAT
CGTCTGGAGA TGGATCGTAT CGCCCGCTCT GGCAACCATC AGGGCGTGAT TCTGAAGGTC
GATCCGTTCC AGTACTCCTC GCTGAACGAG CTGGCCGATC GTGCTGAGAA GAAGGCCAAG
GCAATGGAGG CCGCGAATTC GGCGGCCGCC CGTATTGCTG CGCGACCGCT GTTTATCGCA
TTGGACGGCG TGACCGATCC GCAGAACCTG GGTGCCGTGA TTCGTTCGGC GGCCGCATTC
GGTGCCAATG GTGTGATTCT GCCGGAACGC CGTTCCGCTT CAGTGAACGC CGCCGCTTGG
AAGGTGTCTG CCGGTGCGGC CGCGCATATG CCGGTGGCGC GCGTGGTGAA CCTGACTAAG
GCACTTGAGG GCTTGAAGGA GCGTGGATAC TACGTTGTCG GCCTTGACGG TGGCGGCGAT
AAGCTCGTCG GCGAGACTGG CTTTGAATCC GATCCGCTCG TTGTAGTGCT CGGTTCGGAA
GGCAGCGGTT TGGGCCGACT GGTGCGCGAA ACCTGCGACG CGATTGCCGG CATCCCGATC
AGCTCGTCTG TTGAGTCGCT GAACGCTTCA GTGGCGGCGG GTATCAGCCT GTACGCGGTG
TCCAACGCAC GGCGCAAGGC TGCGGCGGAG TGA
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| Protein sequence | MAIKKGPTKG SGGKHRNKLK GYGPTPKAED RVYHKAYKAK KAAERRQMAD PRLAARRRVD
KFASADTSDL VYGRNSVLEA LRVGVPSSTL YIMSRIEHDD RTREIVKIAG MNGLHMLEAD
RLEMDRIARS GNHQGVILKV DPFQYSSLNE LADRAEKKAK AMEAANSAAA RIAARPLFIA
LDGVTDPQNL GAVIRSAAAF GANGVILPER RSASVNAAAW KVSAGAAAHM PVARVVNLTK
ALEGLKERGY YVVGLDGGGD KLVGETGFES DPLVVVLGSE GSGLGRLVRE TCDAIAGIPI
SSSVESLNAS VAAGISLYAV SNARRKAAAE
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