| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1469 |
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| Symbol | srtA4 |
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| ID | 6363029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1714154 |
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| End bp | 1715137 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642680656 |
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| Product | sortase |
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| Protein accession | YP_001955412 |
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| Protein GI | 189440331 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC TGCGCAACAT CCTGCCCTTA CTGGTCATTC TCGGTGGAAT GCTCATTCTG
TTCTATCCGA CGATCAGCAA CTTCCTCATC ATGCGCAACG CCAGCCGCGC CGTAAATAAC
TACGACGCCA GCGTTGAAGC ATTGAGCCAG GAACAGTACC AGAAGGTGCT GGATGCTGCG
CACGCCTATA ACGAAAAGCT CGCCCAGAAC GATGCGGGAG AGACCGACGC CCTAACCGGC
GCCGTCAATA CCGCATCCAC GGACGAGGAA TACAACAGTC TGCTCAACAT CGACGGCGAC
GGCATGATGG GATACATCAC CGTGCCCCGT CTGCACGAGA CCCTGCCCAT CTACCACGGC
ACTGCCGAAA AAGTGCTGCA GATAGGCATC GGTCACTTGG AACAGACCTC ACTGCCAGTT
GGTGGCGCGT CCACTCATGC GGCGCTGTCT GGCCACCGAG GGTTGCCCAC GGCAAAACTG
TTCACGGACT TGAACCTTAT GAAAAAAGGC GACAAGTTCT ATATCACAAT ACTTAAAGAC
ACGTATGCGT ATCAGGTCGA TAAGATCACT ACCGTTCTGC CGACTGATGC CAAACAACTG
GCGATTGAGC CCGGCAAGGA TTTGGTCACG CTCATTACCT GCACACCGTA TGCGGTCAAC
ACGCATCGGC TGCTGGTGCG CGGTCATCGT ATTCCATACA CACCACAGCA GCAGAATGAC
GCCAAATCCA CATTCCACGT GGACATTCCG CTGCAGTATT TGTTGCCGTC TCTCGCGCTG
ATTGCCTTGC TTATTGCATG GCATTTGTGG CAGCGGCATG AGCGGCGACG CCGGCAGAGT
GGGAGCGCCA AGGTCGCATC CGGTGATTCT AGCTCCACAG CCATCGAGCC GGACGGTGAC
TTGCCTCCTC AGCCAGCCAA TACAAATAAC CAATCACATT CATCACGGCG GAAAGGACCG
GGCAGACATG TTAGACCCGC ATAG
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| Protein sequence | MKRLRNILPL LVILGGMLIL FYPTISNFLI MRNASRAVNN YDASVEALSQ EQYQKVLDAA
HAYNEKLAQN DAGETDALTG AVNTASTDEE YNSLLNIDGD GMMGYITVPR LHETLPIYHG
TAEKVLQIGI GHLEQTSLPV GGASTHAALS GHRGLPTAKL FTDLNLMKKG DKFYITILKD
TYAYQVDKIT TVLPTDAKQL AIEPGKDLVT LITCTPYAVN THRLLVRGHR IPYTPQQQND
AKSTFHVDIP LQYLLPSLAL IALLIAWHLW QRHERRRRQS GSAKVASGDS SSTAIEPDGD
LPPQPANTNN QSHSSRRKGP GRHVRPA
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