| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1451 |
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| Symbol | ispE |
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| ID | 6363590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1684789 |
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| End bp | 1685739 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642680637 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| Protein accession | YP_001955394 |
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| Protein GI | 189440313 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCGG TAATCTCACA TCCACGCTCA GCCGCTGCCC GACATCAGTC CGATGAGCTC
TCCCCCATCA CCATTACGGT GGATTGCCCG GCGAAAACCA ATCTCACCTT GGAAGTGGGA
CCTGCTCACG ACGAATGGGG CGGACGCCAC GAACTGGACA CCACCTACTG TGCAATCGGC
GTATACGACA CCGTCACCGC AACCGCCAAG CAACCCGGAG CGGGATTCTC TCTGGAGCTC
GAAGGCGCTT ATTTGGGCGA CTTGGCCTCC TCACGCAGCG ACATGCGCCG CAACCATGCG
GTACTGGCCC TCTTCGCCAT GGCCCAGGCG GCCGAGCGCG AGCCGGATGT GGCGTTGACC
ATCACCAAGC GCATTCCCGT GGGTGCCGGA CTAGGCGGCG GTTCAGCCGA CGCCGCGGCG
ACCATGCTGG CGGTCAATCG TCTCTGGGAG CTGAACTGGC CCATAGAGCG CCTGCGCACC
ATTGCCGCCA CGTTGGGCGC GGACATGCCG TTCTGCCTGA CCGGTGGCCT TGCATACGGC
ACCGGTTTCG GCGAACGCAT CACGGATATC GCCCCCGGCA GCCGCGATGA GCTGGCGCTG
ATAGAACAGG GATTCAGCGG CGAAGTATTG GTCGGCGCAT ACCAGTCGCA ACTCAGCACT
CCTGAGGTCT ACCACACCTT TGACATCGTG GGAGCCGCAG AAGGCGACCG CAATCATCTG
CAGGCTGCGG CAATCAGCCT GCATCCCCGC AGCGGGCAGG CCATCGACGC CGCCACGCAG
GCGGGTGCCA GCCATGCATT CGTCTCCGGA TCCGGCCCCT CAGTGGTCGC TTTCGCCGCC
GACGAGGCAG CGGCACAACG CATTATCGAG GTGTGGCGCG ATACAGCTGT GGTCGATCGT
ATTATTCGAG CCAAATCTCC CGAACACCCC AATATCAGCG TCAGACAGTG A
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| Protein sequence | MSPVISHPRS AAARHQSDEL SPITITVDCP AKTNLTLEVG PAHDEWGGRH ELDTTYCAIG
VYDTVTATAK QPGAGFSLEL EGAYLGDLAS SRSDMRRNHA VLALFAMAQA AEREPDVALT
ITKRIPVGAG LGGGSADAAA TMLAVNRLWE LNWPIERLRT IAATLGADMP FCLTGGLAYG
TGFGERITDI APGSRDELAL IEQGFSGEVL VGAYQSQLST PEVYHTFDIV GAAEGDRNHL
QAAAISLHPR SGQAIDAATQ AGASHAFVSG SGPSVVAFAA DEAAAQRIIE VWRDTAVVDR
IIRAKSPEHP NISVRQ
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