Gene BLD_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1435 
SymboldnaN 
ID6363160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1664070 
End bp1665194 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content61% 
IMG OID642680621 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001955378 
Protein GI189440297 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.674698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG AAATCGATAC CGCAGCCCTG GCCGACGCCG TAGCCTGGAC CTCCCGAGTC 
ATCGACGCAC GTCCCTCCAA CCCGATTCTC GCTGGCGTCA AGCTGGAAGC CATTGACGGA
ACGCTGCAAT TCTCCGCCTT CAACTACGAG ATTTCCGCTC GCCACCACAT CGAAGCCGGC
GTTGACGAAG CCGGTTCCGT ACTGGTTCAG GGCAAGCTGC TGGCCGATAT CACCAAATCG
CTGCGTTCGG AGAAAACGTA CCTGGTCACC GACGGCTCCA CGCTGACCAT CACGTCCGGC
AAGTCGAAGT TCACCTTGCA GCTCATGCCC GACACCGAGT ACCCGGATCT GCCCGTGGTA
CCGGCCATGC TCGGCCAAGT CGATGCCCCG ACTTTCGTTC AGGCCGTGAA CCAGGCGTGC
GTTGCCGTCT CCCGCGAAGA AAACCGCCCG GTACTGACCG GCGTTCGCAT GCAATTCCAA
GGCGACAAGG TCGTCATGAC CTCCACCGAT CGCTTCCGTT TGGCCCGCGC CACCTTCACT
TGGACTCCGC AGAACCCGGA CGTCGACACC ACCACGCTGG TTCGCGGCTC CCTGCTCAAG
GATGTGGCCC GTGCTCTTGA CGAGCACCAG AACATCCGCC TTGATTTCGA TGCCGATAGC
CCGACGCTGC TCGGCTTCGA AAACGCCGGC CGCGTCTCCA CCTCCCAGCT CATCGACGGT
GAATTCCCGG CGGTCGACCG CCTGTTCGCC GACGAATATC CGATTCAGGC CGTAGTCAAC
AAGCAGGATT TGCTCGACGC CATCAGCCGT GTGGCTTTGG TCGCCGAACG CAATGCTCCG
ATTCGCATGA CCTTCACCGG TCAGGAAGTG GCGCTGTCCG CCGGATCGGT CGACGAGGCT
CAGGCCAACG AAACACTGGA CATCGACATG GATGGCGACG ACATCACCGT GGCATTCAAC
CCGTCCTACC TGAAGGAGGG TCTGTCCGCC GTAACCGAAC CATTCGTGCG CATCAAAATG
ACGACCCCGG TCAAGCCGGT CGAGTTCAAT GGCCAGCAGG AAGCTGATTC CGACGAGTCC
ATGGACTACC GATACCTGCT CGTGCCGATG CGCTTTAACA ACTGA
 
Protein sequence
MKVEIDTAAL ADAVAWTSRV IDARPSNPIL AGVKLEAIDG TLQFSAFNYE ISARHHIEAG 
VDEAGSVLVQ GKLLADITKS LRSEKTYLVT DGSTLTITSG KSKFTLQLMP DTEYPDLPVV
PAMLGQVDAP TFVQAVNQAC VAVSREENRP VLTGVRMQFQ GDKVVMTSTD RFRLARATFT
WTPQNPDVDT TTLVRGSLLK DVARALDEHQ NIRLDFDADS PTLLGFENAG RVSTSQLIDG
EFPAVDRLFA DEYPIQAVVN KQDLLDAISR VALVAERNAP IRMTFTGQEV ALSAGSVDEA
QANETLDIDM DGDDITVAFN PSYLKEGLSA VTEPFVRIKM TTPVKPVEFN GQQEADSDES
MDYRYLLVPM RFNN