| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1434 |
|---|
| Symbol | recF |
|---|
| ID | 6363159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1662804 |
|---|
| End bp | 1663991 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642680620 |
|---|
| Product | recombinational DNA repair ATPase |
|---|
| Protein accession | YP_001955377 |
|---|
| Protein GI | 189440296 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGATT TCGTACCAGG CGTGAATATC CTGTTCGGCA AGAACGGTCT GGGCAAAACC
AATCTGGTGG AAGCCGTCGA AGTGCTGTCC ACCGGATCGA GCCATCGCAC GTCCAGCACG
TTGCCGCTGA TCGAACGCGG GCAGACCACG GCCACCATCC GCGCGAACGT CGCTGATGAT
GCCGGTCAAA CCACTACGTA TGAAGCGTCA ATTCATGCGC GTGGTGCCAA CCGAGCCCGC
ATCAACTCGG GGTCGTCGCT GTATCTGCGC GATATCATCG GCAAGATTCC CAGCGTTTCC
TTCACTCCCG AAGATCAGCG GTTGGTGTCC GGCGATCCGG GAGCACGCCG CACCATGATG
AATCAGGCTG CGGCTCTGCT CGAGCCCGGA TACATGCAGA CGTTGCAACA GTTCACGCGC
ATCGCCAAAC AGCGTGCCAC ATTGTTGAAG CAATTGAATG CCAATGTCAA CAATGGCCAG
CCGATGGATG CGGTTCTGAG CGGTTTGGAA ATCTGGACCG GCCAGTTCAT CGAAGCCGGT
GTGGCGTTGA CCCGTATGCG CGCTCATGTG ATCGGTCTGC TTGCCGAGCC ATTTGCCGCG
ATTTACGCCG ACTTGGCCGG TGCCGGCGAG CAGGTGACGC TCACTTATGC GCCTTCATTC
GACGAAGTGC TGATGTTCGA CGATCCGCAT CCGCAGATTA GCGAGCATTT CCAACGCATC
TACCCCGGTG AAGTGGCTCG CGGCGTGAAC CTTATCGGTC CGCAGCGCGA TGACATGAAC
CTTGAGTTGG GCGGTATTCC CGCCCGCGAG TTCGCTTCGA ACGGCGAGAT GTGGACGATG
GCGTTGGCCT TGAAAATGGC ATTGTTCGAA ATAGTGCGTG ACCGGTTGGG ATTGCAGCCG
ATTGTGATTC TCGATGATGT GTTCGCCCAG CTTGACGACA GCCGGCGCAC GCAGATTCTT
GATTTCGCCA GAAAACAGGA TCAGGTGCTG ATTACCGTGG CCGCTGAAGG CGATGTGCCC
GACTATGAAT CGGCCCATCG CATCGACGTG GCCGCACTGG ACGAACCAGC TTCCGTGATA
TTGCCAACTC TGGGCAATTT GTCCAATTCG CGGGAAAATG AGAGTTTGGG TGGGTATGAC
GAAAAAACCG CGGTGGACAG CGCGTCCGTA GAACGGAAAG TGTCATGA
|
|---|
| Protein sequence | MVDFVPGVNI LFGKNGLGKT NLVEAVEVLS TGSSHRTSST LPLIERGQTT ATIRANVADD
AGQTTTYEAS IHARGANRAR INSGSSLYLR DIIGKIPSVS FTPEDQRLVS GDPGARRTMM
NQAAALLEPG YMQTLQQFTR IAKQRATLLK QLNANVNNGQ PMDAVLSGLE IWTGQFIEAG
VALTRMRAHV IGLLAEPFAA IYADLAGAGE QVTLTYAPSF DEVLMFDDPH PQISEHFQRI
YPGEVARGVN LIGPQRDDMN LELGGIPARE FASNGEMWTM ALALKMALFE IVRDRLGLQP
IVILDDVFAQ LDDSRRTQIL DFARKQDQVL ITVAAEGDVP DYESAHRIDV AALDEPASVI
LPTLGNLSNS RENESLGGYD EKTAVDSASV ERKVS
|
|---|
| |