Gene BLD_1406 details

Gene Information

• Locus tag: BLD_1406
• Symbol: trxB1
• ID: 6363446
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: -
• Start bp: 1631240
• End bp: 1633156
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642680590
• Product: thioredoxin reductase
• Protein accession: YP_001955349
• Protein GI: 189440268
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0492] Thioredoxin reductase
• TIGRFAM ID: [TIGR01292] thioredoxin-disulfide reductase; [TIGR03143] putative alkyl hydroperoxide reductase F subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCAGA CCAACAATCT CTATGACGTC GTCGTCATTG GTGGCGGGCC TGCTGGCCTG 
ACGGCCGGCC TGTACCTGGC CCGCGCTCGC TACCGCGTGC TGATTCTCGA AAAGGACGAT 
TTCGGCGGCC AGATCACCAT CACCAACGAA GTCGTCAACT ATCCGGGCGT GGGCCGCACC 
ACGGGCCGCG CACTCACCCA GACCATGCGC CAGCAGGCTC AGGACTTCGG TGCCGAATTC 
CTCTCCGCCG AAGCCACCGG TCTCGACGTG GATGGTGACA TCAAAACCGT GCACACCTCA 
CGCGGCGACC TCAAGACCTT CGGCATCCTC ATCGCCACCG GCGCCAGCCC GCGCAAGCTG 
GGCTTCGAGG GCGAGGCCGA GTACGCCGGC CGCGGCGTGG CCTACTGCGC CACCTGCGAC 
GGCGAGTTCT TCACCGGCAA GGAAGTACTG GTGGTCGGCG GCGGATTCGC CGCAGCCGAG 
GAATCCGTGT TCCTGACCAA ATACGCCTCC AAAGTCACCG TGCTCGTGCG CGAACCGGAC 
TTCACCTGCG ATGCCGCAGT GGCCGCCGAA GCCAAGAACA ACCCGAAGAT CGACGTGCGT 
TATCAGGTCG AGCTGAAGGG CGTCACCGCC GGCCAAGGAG GCCTGCGAGA AGCCTCAATC 
CTGAACCTTG CCACCGGCCA GACCGAAACG TGGAAGCCCG CCGACGCCGG CACCTTCGGC 
GTCTTCGTGT TCGCCGGCTA TGTGCCCGCC ACCGATTTGG TGCGCGGCGT GGTGGAGCTC 
GACGACCACG GTTACGTGGT CACGCACGAC TACCTCAGAA CCTCGGTGCC GGGCGTGTAC 
GCGGCCGGCG ATCTGCGCGT CAAGAACCTG CGCCAAGTGG TCACCGCCAC CGCCGACGGT 
GCGATTGCCG CCGTGGAACT GGAGCGTTAC GCCAAGCAGA TGAGCGAGAA AACCGGCTTG 
GTGCCGCCGC GTCCCACTGC TTCCGCTTAT GAGGAGTCCG AGGCCAAGGC CGCCTCCGCC 
GCCTCGGCCG CTGGCACGAC GCCCGCCCCG GCTCCCGCCA AACGCAGCGC CGATGCCGCA 
GCCGCAGCCA GCGCCGCCAA GAAGCCCGGC GAACTGTTCT CCGCCGCCGT CAAGCAGCAG 
CTTGGCGTGG TCTTCGGACG CATGACCCGC CCGGTCACGC TCGCTCTCGA GCTGGACGGC 
ACTCCGCTTT CGGCGGAATT GCAGGGTTTC ATCGGCGAGA TGGTTGCGCT GTCCGGCGGC 
AAGCTGAACT CGGTTGCCGT TGATGCCGCA GGGCTGATCA CGGCGGTGGA TGGTGCTTCT 
GTGCCTACTT CTTTGGTGGT CGGCGAACCG CTGTCCGTCA CCTTGCCGGA CGGCACCGAA 
CTGCCCACTT ATGGTTCGTT GGACGATTCC GGCCGCGCCA CATTCGACGT CGCCGGCGTC 
CTGCCGCTCG CCCGTCCGAC CGTGCGCATC TGCGTGCCGG CTGAGGGCGA CGGCAAGGCC 
GGCAAGGACG GCAATGGTTC ACTGGTCTTC ACCGGTCTGG CCTTCCACGG CGTACCTTCC 
GGCCATGAGT TCAACTCGTT CGTGCTCGGC CTGTACAACG TGGCCGGTCC CGGCCAGCCG 
CTGGGCGACG ACCTGATCGA ACGCGCGAAG TCCATCACAG ACCCGCTGAA CATCATGATC 
CTCGTCTCGC TCACCTGCAC GATGTGTCCG GAAACCGTGC TTGCTTCCCA GCGCATTGCC 
TCCCTGAGCC CGGCCGTGCG CGCCGAAGCC TACGACGTCT CGCACTTCCC CGAACTCAAG 
GACCAGTACG GCGCGATGAG CGTGCCCTGC ATCGTCATCA CCCACGCCGA CGGCACCCAG 
CAAGTTGAAT TCGGCAAAAA GAGCATCCCC CAAATGCTCG AACTGGTCGG CGCGTAA 

 

Protein sequence

MTQTNNLYDV VVIGGGPAGL TAGLYLARAR YRVLILEKDD FGGQITITNE VVNYPGVGRT 
TGRALTQTMR QQAQDFGAEF LSAEATGLDV DGDIKTVHTS RGDLKTFGIL IATGASPRKL 
GFEGEAEYAG RGVAYCATCD GEFFTGKEVL VVGGGFAAAE ESVFLTKYAS KVTVLVREPD 
FTCDAAVAAE AKNNPKIDVR YQVELKGVTA GQGGLREASI LNLATGQTET WKPADAGTFG 
VFVFAGYVPA TDLVRGVVEL DDHGYVVTHD YLRTSVPGVY AAGDLRVKNL RQVVTATADG 
AIAAVELERY AKQMSEKTGL VPPRPTASAY EESEAKAASA ASAAGTTPAP APAKRSADAA 
AAASAAKKPG ELFSAAVKQQ LGVVFGRMTR PVTLALELDG TPLSAELQGF IGEMVALSGG 
KLNSVAVDAA GLITAVDGAS VPTSLVVGEP LSVTLPDGTE LPTYGSLDDS GRATFDVAGV 
LPLARPTVRI CVPAEGDGKA GKDGNGSLVF TGLAFHGVPS GHEFNSFVLG LYNVAGPGQP 
LGDDLIERAK SITDPLNIMI LVSLTCTMCP ETVLASQRIA SLSPAVRAEA YDVSHFPELK 
DQYGAMSVPC IVITHADGTQ QVEFGKKSIP QMLELVGA