Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1396 |
Symbol | putP |
ID | 6364109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1616605 |
End bp | 1618266 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642680580 |
Product | Na+/proline symporter |
Protein accession | YP_001955339 |
Protein GI | 189440258 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGGG AGGTGTCGCA GTTGGCCAAC GATTTCTGGA TTCTGCTGGC CATGGTCATC TATTTTGCGG CCATGCTGTC CATCGGATTC ATCTACTCCA AACGCTCCAA CTCCTCCTCC AAGGAATACT TTGCGGGCGG GCGCGGCGTG GGGCCGTGGC TCACGGCCCT GAGCGCCGAA GCCTCCGACA TGAGCGGCTG GCTGCTGATG GGCCTGCCGG GCCTGGCCTA CTTCACCGGC GCGGCCGACC CGATGTGGAC CGCCATCGGC CTGGCGCTCG GCACCTATCT CAACTGGAAG CTTGTGGCCC GGCGACTGCG CCGCTACTCG GTAGTGGCCG GCGATGCCAT CACCATTCCT GACTTCTTCG CCAAGCGTTT CCATGACAAG AAGGGCGTGG TCTCCACCAT CGCGGCCGTG ATCATCCTGG TGTTCTTCAG CGTGTACGTG GGCAGCTGCT TCGTGACCGT GGGCAAGCTG TTCGCCACGT TGTTCGGTTT CGACTACCAC GTCATGATGA TCATCGGCGC GGTGGTCGTG TTCGTCTACA CCGTGGTGGG CGGCTACTTG TCGGTGGTGA TGACCGACTT CATTCAAGGC ATGCTCATGT TCTTCGCGCT CGCGGTGGTG TTCATCGGCA CCGTGGCCAG CGCGGGCGGT GTCGACAACA CCGTGGAATT CCTGCGTGCC ATCCCCGGCT ACCTGTCCGG CACGCAGGTG GCCGCGCCCA AGCTGGACCC GGCCACCGGC CAGCAGCTCG TCGAGGCGGG CAAGGCCGTG TTCGGCGCGC CCTCCGACTA CGGCATCATC ACCATCATCT CCATGCTGGC GTGGGGCCTG GGTTACTTCG GTATGCCGCA GGTGCTGGTG CGCTTCCTGT CCATCCGCAG CGTGGAAGAA GTGCGCAAGT CCCGAATCAT CGCCACCTCC TGGTGCGTGA TTTCGCTGGG TTGCGCAGTG TGCATCGGCT TGGTGGGGCG TGCGATGATG CCCACCGAAC TGCTGACCTC CACCGATGCG GAAACCATCT TCATCGTGCT GGCGCAGACC CTGCTGCCGA GCTTCATGTG CGGCGTGGTG GTCTCCGGCA TTTTCGCGGC CTCGATGAGC TCCAGCTCCT CGTATCTGAT CATCGGCGCT TCGGCCATGG GCGAGAACAT CTTCCGCGGG CTGCTGCACC GCAAGGCCAC CGACAAGCAG GTCATGATTG TGGCCAGGGT CACGCTGGTG GTCATGTTCC TGTTCGGCAT TCTGGTGGCA TACGACCAGA ACTCGTCGAT CTTCCAGGTG GTGTCTTACG CGTGGGCCGG GCTTGGTGCC TCATTCGGCC CGTTGATGCT GTGCTCGCTA TACTGGCGTC GCGCCAACAA GGCCGGCGCC GTGGCCGGCA TGCTGTCCGG CACGGCGGCC GTGCTGCTCT GGCACAACCT CGTCAAGCCC TTGGGCGGCG TATTCGCCAT CTATGAGCTG CTGCCGGCGT TCATCATTTC GCTGCTGTTC ATCGTGGTGG TTTCGTTGCT GACCGCCAAG CCGAACGAGC GTATGCTCTA CGAGTTCGAC CACTACATGG ACGATCCGCT GCCCGGCACC CTGCCGTCCG GCACCGTGCT CGTCGACGAG CCCATGGGAG CCATGGAGTC CGAGGTCCGC AGCGGCAAAT GA
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Protein sequence | MIGEVSQLAN DFWILLAMVI YFAAMLSIGF IYSKRSNSSS KEYFAGGRGV GPWLTALSAE ASDMSGWLLM GLPGLAYFTG AADPMWTAIG LALGTYLNWK LVARRLRRYS VVAGDAITIP DFFAKRFHDK KGVVSTIAAV IILVFFSVYV GSCFVTVGKL FATLFGFDYH VMMIIGAVVV FVYTVVGGYL SVVMTDFIQG MLMFFALAVV FIGTVASAGG VDNTVEFLRA IPGYLSGTQV AAPKLDPATG QQLVEAGKAV FGAPSDYGII TIISMLAWGL GYFGMPQVLV RFLSIRSVEE VRKSRIIATS WCVISLGCAV CIGLVGRAMM PTELLTSTDA ETIFIVLAQT LLPSFMCGVV VSGIFAASMS SSSSYLIIGA SAMGENIFRG LLHRKATDKQ VMIVARVTLV VMFLFGILVA YDQNSSIFQV VSYAWAGLGA SFGPLMLCSL YWRRANKAGA VAGMLSGTAA VLLWHNLVKP LGGVFAIYEL LPAFIISLLF IVVVSLLTAK PNERMLYEFD HYMDDPLPGT LPSGTVLVDE PMGAMESEVR SGK
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