Gene BLD_1393 details

Gene Information

• Locus tag: BLD_1393
• Symbol: trpS
• ID: 6363151
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 1612147
• End bp: 1613238
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642680577
• Product: tryptophanyl-tRNA synthetase
• Protein accession: YP_001955336
• Protein GI: 189440255
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0180] Tryptophanyl-tRNA synthetase
• TIGRFAM ID: [TIGR00233] tryptophanyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACG AGCAGCAACT GACAGCGGCA GGCAATGAGA TGAGCGCGAG CTTCCTCGCG 
GCCAAAAAGC GTTCGGACGA AACGCTCGCC AAGCTGGAGG CCAAGCCGTC GTCCTTCACC 
ATGTTGACCG GCGACCGCCC GACCGGCCGG CTGCACCTCG GCCACTACTT CGGCTCGATC 
CGTGAGCGTG TCGCCATGCA GGAGCGCGGC GTCAACACGA ACATCATCAT CGCCGACTAC 
CAGGTGATCA CCGACCGCGA CACCACCGAG CACATCCAAG ACAACGTGCT GAACCTGGTG 
CTCGACTACA TGGCCGCCGG CATCGATCCG AACAAGACCA TGATGTTCAC CCACTCCGCC 
GTGCCGGCCG AGAACCAGCT ACTGCTGCCG TTCCTGTCCT TGGTCACCGA GGCCGAGCTG 
CACCGCAACC CGACCGTGAA GTCCGAGATG GAGGCGTCCG GCCACGCGCT GACCGGTCTG 
CTGCTCACCT ACCCGGTGCA TCAGGCGTGC GACATCCTCT TCTGCAAGGC CAATGTCGTG 
CCGATCGGCA AGGACAACCT GCCGCACGTG GAAATCACGC GCACCATCGC CCGCCGTTTC 
AACGAGCGTT ACGCCAAGAA GAACCCGGTG TTCCCGGAGC CGGCCGCCAT TCTGTCTGAG 
GCACCGGAGA TTCCGGGTCT CGACGGCCGC AAGATGAGCA AGTCGTACGG CAACTCCATC 
ATGCTGGGCG CCACCGCCGA GGAAACCGCC AAGCTCATCA AGAAGAGCCC GACCGATTCC 
GAGCGCCGCA TCACCTTCGA CCCGGTTGCC CGCCCGCAGG TCTCCGCCCT GCTGACCACC 
GCCGGCCTGG TGACCGGCCG CGACCCGAAG GACATCGCCG AGGAGATCGG TGATTCCGGC 
GCCGGCGCGC TCAAGGCATA CGTCATCGAA TCAGTCAACG AGTTCCTGGC CCCGCACCGC 
GAGCGCCGCG CCGAGCTGGC CAAGGACATG GATTCCATTC GTGACATCCT GCACGACGGC 
AACAAGCGCG CCAACGCCAT CGCCGAGGAG ACCCTCGACC AGGTGCGCGA GGCCATGGGC 
ATGAAGTACT GA 

 

Protein sequence

MTDEQQLTAA GNEMSASFLA AKKRSDETLA KLEAKPSSFT MLTGDRPTGR LHLGHYFGSI 
RERVAMQERG VNTNIIIADY QVITDRDTTE HIQDNVLNLV LDYMAAGIDP NKTMMFTHSA 
VPAENQLLLP FLSLVTEAEL HRNPTVKSEM EASGHALTGL LLTYPVHQAC DILFCKANVV 
PIGKDNLPHV EITRTIARRF NERYAKKNPV FPEPAAILSE APEIPGLDGR KMSKSYGNSI 
MLGATAEETA KLIKKSPTDS ERRITFDPVA RPQVSALLTT AGLVTGRDPK DIAEEIGDSG 
AGALKAYVIE SVNEFLAPHR ERRAELAKDM DSIRDILHDG NKRANAIAEE TLDQVREAMG 
MKY