| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1378 |
|---|
| Symbol | |
|---|
| ID | 6363477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1594735 |
|---|
| End bp | 1595265 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642680562 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001955321 |
|---|
| Protein GI | 189440240 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC TGACATTCGC CCTGCTCAAG TATGGATTCC TGATCCTGCT GTGGATATTC
ATCTGGCTGG CCGTACGTTC GCTGCGCAAG GACATCGAGA CGTTCAGTCC GCGACCTTCG
CGCGCGCGTC GTCGCCGTGA GCGTGAAGCG CATAAGGCCA AGGCCGAAAC GCCGCAGGCA
GCTGCGCCGC GCCCGCATCG CCAGCCCAGC GCTTCCGCGT CGTCCGCCGC CTCGGCGCAG
CCTACCCTGT TGGTCATCAT CGATGGTCCG CTTGCCGGCA GCTCCGTGCC GCTGGCCGAA
GCCGACATCA CGCTTGGCCG CGCCGCCTCG AATACCGTGG TGCTCGATGA CGAATTCGTG
TCTTCCCACC ATGCCCGTGT CTACCGTGAC ACGCGCTCCG GGCAGTGGGC CATTGAAGAC
CTGAACTCCA CCAATGGCAC CGTGGTCAAC CAGCAGCGCA TCAACCGCCC CACCATTCTG
CCCGCTCGTA TTCCTGTGCG CATCGGCGCC ACCACCTTCG AACTGAGGTA G
|
|---|
| Protein sequence | MTELTFALLK YGFLILLWIF IWLAVRSLRK DIETFSPRPS RARRRREREA HKAKAETPQA
AAPRPHRQPS ASASSAASAQ PTLLVIIDGP LAGSSVPLAE ADITLGRAAS NTVVLDDEFV
SSHHARVYRD TRSGQWAIED LNSTNGTVVN QQRINRPTIL PARIPVRIGA TTFELR
|
|---|
| |