| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1353 |
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| Symbol | degQ |
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| ID | 6363180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1565320 |
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| End bp | 1567341 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642680536 |
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| Product | trypsin-like serine protease |
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| Protein accession | YP_001955296 |
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| Protein GI | 189440215 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACG AATTTAACCC GCAGGGCGTC GACCAGACCC CGCGGAATAA CGAAAACCCC
AATAGTACTG CCGATACCGG CAACGCCGAG CCGAAGAACC CGTTTGTGGG TGGCGACTCG
GTTGATGCCG GCAACGCCAG CGATTCCAGC GAGCAGCAAG CCCCGGTTTC CTCGGCCGCC
CTCGCTGCCG ATCAGCAGCC TACGCAAGCC GCTACCGAGC CCATCCCGGA CTACGCCTCC
GCCAAGGGCG AGAGCACGGT GGTCTCCTCC TCGCCGGCTT CTCCGGCAGC GCCGGCCGCA
GGCCAGACCT CGGCCACAAC TCCGCTGTAT CGTCCGGCCC CGGAATATGG CGCTTATGGT
CCGACCCCGA CTCAGGCACA GGGCCAGCAG GGCGGCCAGG CCGGCAGCAA TGCCCAGCCC
ACGCAGCAAT TCCCGTTCGG TCAGCCTACA CAGCAAACCC CACAGGGCCA GCAGGACAAC
CGCAATCCCT ACTACACCAA TAACCCGCAG CCGCAGGGCA ACGGCAATCC GTTCAATCCG
CCCACGCAGC CGCAGCAGAA CAACGGCAAC CCGTTTGCCA GCCAGTCCGG TCAGAATGGC
CAGAATGGCC AGCAGCCCCA GCAGGGCGGT CTGTTCGGTT TCGGCGCTCC CGGTACCGGT
ACGCCGAACG GTCAAGGTCC GACCCAGCCG GGACAGCCCG GTCAGCCCGG TCAGCCCGGC
CCCGCCAAGC AGGGCATGTC CAAGACGGCG AGCAACATCC TCATCGCCGT GGTCGCCGCC
GTTCTGGCTG CGGCCCTCTG CCTGGGCCTC GGCTACGGTG CCCTCACCAG CGGCCTGATC
ACCTTGCCGA CCAGCAACTC GCTTACCAAC GTCAGCTCGA ATAAGTCCGG CTCCGGGTCC
GCCACCGCCA AGAGCGGCGA AGCCCCCGAC TGGCAGACTG TCGCCAGCGA TGTCTCCGGC
TCCGTGGTCT CCATCCAGAC CGCGTTGAGC AACGGCACCG CCAAGGGCTC CGGTGCCATC
ATCGACACCG AAGGCCACAT CATCACCAAC AACCACGTGA TCTCCGGTGC CCAGCAGATT
CAGGTGACGC TTGCCAACGG CAACATGTAT TCCGCCACGC TCGTCGGCAC TGACGCCACC
ACCGATCTTG CGGTCATCAA GCTCGACAAC CCGCCGAGCG ACCTCAAGGC CGTGGAATTC
GCCGATTCCG ACAAGCTCGC CGTCGGCGAG AACGTGATGG CCATCGGCAA CCCGCTCGGC
TACGACGACA CCGCCACCAC CGGTATCGTC TCCGCCCTGA ACCGCCCGGT GACCGTGACC
GACGACAACA ACAACGAGAT CGTCACCAAC GCCGTCCAGA TCGACGCGGC CATCAACCCC
GGCAACTCCG GCGGCCCGAC CTTCAACGCG GCCGGCCAGG TGATCGGCAT CAACTCCTCG
ATCGCCTCCA CCGCCACCTC CTCCGACTCC GCCGGCTCCA TCGGCATCGG CTTCGCCATC
CCGTCCAACC TCGTCAAGCG TGTGGCCGAC GAAATCATCA AGGACGGCAA GGTCAAGCAC
GTTGCCCTCG GCGTGGTCAT CAAGTCTGAC ACGGTTGAAG CCGACGGCGT GACCCGCGGC
GGCGCGACCA TCACCAAGTC CAGCGCCACC GGCAGCGCGG TCGTCTCCGG CGGCCCGGCC
GACAAGGCCG GCCTTAAGGA GGGCGACACC ATCGTGGCCT TCAACGGCAA CGCCGTGAAC
AACAACTACT CGCTGCTTGG TTACGTTCGT GCCGCGGCTT TGGGAGACAA GGTGACGCTG
ACCATCGTGC GCGACGGCAA GACCATGAAT GTGGACGTGA CGCTCGATCA GGAGGAGTCG
TCGGTGAACG GTTCGTCCGG CTCCGATTCC AACGGCAACA GCCAGAATAA CCAGAACAAC
CAGAACGGCA ATGGCCAGAA CGGTTACGGT AATGGCAATG GCAACAGCGA TGGCGGCACC
GGTGACGGCG GCGGCTTCTC CGACCCATTC GGCCTGTGGT AA
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| Protein sequence | MADEFNPQGV DQTPRNNENP NSTADTGNAE PKNPFVGGDS VDAGNASDSS EQQAPVSSAA
LAADQQPTQA ATEPIPDYAS AKGESTVVSS SPASPAAPAA GQTSATTPLY RPAPEYGAYG
PTPTQAQGQQ GGQAGSNAQP TQQFPFGQPT QQTPQGQQDN RNPYYTNNPQ PQGNGNPFNP
PTQPQQNNGN PFASQSGQNG QNGQQPQQGG LFGFGAPGTG TPNGQGPTQP GQPGQPGQPG
PAKQGMSKTA SNILIAVVAA VLAAALCLGL GYGALTSGLI TLPTSNSLTN VSSNKSGSGS
ATAKSGEAPD WQTVASDVSG SVVSIQTALS NGTAKGSGAI IDTEGHIITN NHVISGAQQI
QVTLANGNMY SATLVGTDAT TDLAVIKLDN PPSDLKAVEF ADSDKLAVGE NVMAIGNPLG
YDDTATTGIV SALNRPVTVT DDNNNEIVTN AVQIDAAINP GNSGGPTFNA AGQVIGINSS
IASTATSSDS AGSIGIGFAI PSNLVKRVAD EIIKDGKVKH VALGVVIKSD TVEADGVTRG
GATITKSSAT GSAVVSGGPA DKAGLKEGDT IVAFNGNAVN NNYSLLGYVR AAALGDKVTL
TIVRDGKTMN VDVTLDQEES SVNGSSGSDS NGNSQNNQNN QNGNGQNGYG NGNGNSDGGT
GDGGGFSDPF GLW
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