| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1326 |
|---|
| Symbol | ilvC1 |
|---|
| ID | 6363568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1530845 |
|---|
| End bp | 1531897 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642680508 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_001955269 |
|---|
| Protein GI | 189440188 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAC AGATCTGGTA TGAGAACGAC GGTGATCTCT CTGTTCTCGA AGGCAAGAAG
GTCGCAATCA TCGGCTACGG CTCCCAGGGC CACGCCCACG CGCTGAACCT TCGCGATTCC
GGTGTCGACG TGGTCGTCGG CCTGCGTCCG ACCTCCAAGT CGGTCGACTT CGCCAAGGAG
CAGGGCCTCG AGGTCAAGTC CGTGGCCGAG GCTTCCGCCG AGGCCGACGT GATCATGATT
CTGGCCCCCG ACCAGTACCA GCGCACCATC TGGGCCAACG ACATCGAGCC CAACATCAAG
CCGGGTGCTG CTGTTGCGTT CGCTCATGGC TTCAACATTC ACTACGGCTA CATCAAGCCG
TCTGAGGATC ACCCGGTGTT CATGGTTGCC CCGAAGGGCC CGGGCCACAT CGTTCGTCGT
GAGTACGCCG CTGGCCGTGG CGTGCCGGTC GTCGTGGCCG TCGAGCAGGA TCCGCGTGGC
GACGGCTGGG CTCTGACCCT GGCCTACGCC AAGGCCCTCG GTGCCCTGCG CGCCGGTGCC
ATCAAGACCA CCTTCAAGGA AGAGACCGAG ACCGATCTCT TCGGCGAGCA GAACGTGCTC
ATGGGTGGCG TGAACAAGCT CGTCGAGATG GGCTTCGAAG TCCTGACCGA CGCCGGCTAC
CAGCCGGAAA TCGCCTACTT CGAGGTCTGC CACGAGCTCA AGATGCTCGT CGACCTGATG
AACGAGGGCG GTCTGAACAA GGCTCGTTGG TCCTGCTCTG ACACCGCTCA GTACGGCGAC
TACGTCAACA CCGTCATCAA CGAGGACTGC CGCAAGCGCA TGGAATACCA CCTGCAGCGC
ATCCAGGACG GCTCCTTCGC CAAGGAGTTC ATCGACGATC AGGATGCCGG CGCCCCGCAC
TTCAAGGAGC TGCAGGAGAA GTACTCCAAC GAGCGCATCG AGACCGTCGG CCCGAAGCTG
CGCGCCATGT TCTCCTGGAA CAAGGATGGC GTCAAGGATG CCGACGAGGC CAATTCCTTC
ACCGGTAAGA TCGCCCGCGC TCAGGTTCAG TGA
|
|---|
| Protein sequence | MAAQIWYEND GDLSVLEGKK VAIIGYGSQG HAHALNLRDS GVDVVVGLRP TSKSVDFAKE
QGLEVKSVAE ASAEADVIMI LAPDQYQRTI WANDIEPNIK PGAAVAFAHG FNIHYGYIKP
SEDHPVFMVA PKGPGHIVRR EYAAGRGVPV VVAVEQDPRG DGWALTLAYA KALGALRAGA
IKTTFKEETE TDLFGEQNVL MGGVNKLVEM GFEVLTDAGY QPEIAYFEVC HELKMLVDLM
NEGGLNKARW SCSDTAQYGD YVNTVINEDC RKRMEYHLQR IQDGSFAKEF IDDQDAGAPH
FKELQEKYSN ERIETVGPKL RAMFSWNKDG VKDADEANSF TGKIARAQVQ
|
|---|
| |