| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1302 |
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| Symbol | |
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| ID | 6364528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1501927 |
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| End bp | 1504068 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642680484 |
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| Product | putative beta-xylosidase |
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| Protein accession | YP_001955245 |
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| Protein GI | 189440164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAA CCATCAGCAA CGGTGTATCC GCCAGCTACA GCCCTGCGGA AGACGAGCTC
GGCGCAGCTG ACCCCACCGC CTTGCTTGCC GAATCTGGCG ATTTGAAGCC GCTGGCCGAA
CGCACTTATA CGAATCCGGT TCTATATGCG GACGGTAAGT CCCATACCGC GCCCGACCCG
TTCGTGCTCA AATACCGCGA CCTCTACTAC TGCTACGCCA CCGACGAGCA CGGCATTCTG
GTCTCCACCT CACCGGACAT GGTGCACTGG ACCTCACATG GATTCTGCTA CACCGAAGCC
GGACGCAGAA ACTTCTGGGC CCCATCGGTG ATTCTCATCA ACGGCGTCTT TCACATGTAC
TTCTCGAATA TGCCGGCCGA GGAGACCGAC ACCCACACGG AAATCATGCG TGTGGCCGTG
AGCGAGGATC CGCTCGGCCC GTTCGAAAAG AAAGCGGAGC TGTTCAACAC CTTTGCCATC
GACTCCCAAG TGGTCTATGG CGATGACGGC CAGTTGTACT TGCTTTACGC CGACAATCAG
GTCACCGGCC TGAGCGATGA CCGGCCCGGA ACCTCCGTGA TGATCGATCG CCTTGTGACC
CCGTATTCGC GTGAGAACAA ACCGCGCCCG CTCATCGTGC CCACCATGGA CGAGGAGATC
TTTGCCCGCA ACCGTTTCGG CGATGGCCGC GACTGGCACA CCGTGGAAGG CGCCACATAC
TTTGCCTACC GTGACCGCGC GTTCATCACC TACTCGGCCA ACGCCTACGA GCATGAGGAC
TACTTCGTCG GATACTCGTA CGCGCAGCTG CCGAACAAGC AGGCCGACGC CCACATCGAT
CAGTTCGATT GGACGAAACA GCTCAACGAG AACCGCTTCG ATCCGCTGCT TATCCGCAGC
CCGAAGGTTG AAGGCACGGG CCACAACTCC ATAGTCAAAG CGCCCAATGC CGTTGATGAC
TGGATTGTCT ACCACGGCCG TAACGCCGAT GACGAGCTGT ATGTGGGCAC CGAACAGCGC
GTAATGCGCA TCGACCCGCT GTACTACGCC GAAGGAGGGC TCGACACCCC AGGACCTACC
GCCGCCGCTC AAAGCGCACC GCTGTATGGC ACTGTGCATG ATGATTTTGC GGATGGCCTG
AACGCCGGAT GGTCGGTTAT TTCCGGCGCG GCCCACACCG AATCCGATGC GGACGGTCAC
GCGCTTGTTG CCGACGAATC CAGTGTATTC ATCGCTGTGT CGGGCAAATC GTCCGCAACT
CAAGTGATTG ACGTCTGGGC CAAAGCTCCC GTCACCCCAC TGGGCGCACG ATTCGGCATC
GTGGTGCGGT ACCAGGATGT CAACAACCTC ACCAAACTCG AGGTGGATGC TGGCCGTCAG
GTAATTAGCG TGGTCGATGT GATCGGCGGC GTTGCCTCCG AACGCGTGAC CAATGCCGAC
CTCCATGACT TCGATTCCCA TGCCTGGCAT GAGTACCGGC TTGAGCGCCG CTACTGCAGG
CTGGAGATCC GCATTGATGG CCGTTTCGCC GCGTCCTGCA CCATCAGTGA TAAGCCCGGT
CGGGCGGGAT TGTTCTCGTT GCGAACGGGG GCCGCGTTCA GCGCATATGC GGCCACTGAA
CATGTGAATC TGTGGGGTGC CGGATTGCGG GATCTCGGTC GAGAATTGCA TGCTGACCGC
CGACTCGTCA TCGACGGCGG CGTGAGGCCC AGCGGCGTGT GTCCGGTAAC ACTCGAACTG
GCATATCCGC TGGTCAGCAA CCGTTTCGTC CTTGATTTCG CTGAACAGAC GAGCCGCGGG
CAGGCGCTGT TGTCTCTTGG CGAATACCGT TTGTCCGGCA CGGCATCATC CGTGGAGTTC
ATGCGCAACG GCAAGTCGCT GCCTTCCACC CCGGAGCCGG CCAGGCTGCG TGTCTTTGAA
GACAACGTCC GCCGTGACCG TTCGGGCCGA GCCGTGCTCA CCATCCGTAT CGAAGCTCTG
AACGGCACGA TGCGACTGCA CCTACGTGGC AAAACCTGGC AGGTGCCGTT TACGGACAAT
GCGGCCCGTG CCCGTATCAC TCTTGATCGC GCATCCCTGA CCGGATACGA GAGGACATCG
CTGGAATCCA GCATCGAGGA AAGGAGTGCG TCCGGCAATT GA
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| Protein sequence | MTATISNGVS ASYSPAEDEL GAADPTALLA ESGDLKPLAE RTYTNPVLYA DGKSHTAPDP
FVLKYRDLYY CYATDEHGIL VSTSPDMVHW TSHGFCYTEA GRRNFWAPSV ILINGVFHMY
FSNMPAEETD THTEIMRVAV SEDPLGPFEK KAELFNTFAI DSQVVYGDDG QLYLLYADNQ
VTGLSDDRPG TSVMIDRLVT PYSRENKPRP LIVPTMDEEI FARNRFGDGR DWHTVEGATY
FAYRDRAFIT YSANAYEHED YFVGYSYAQL PNKQADAHID QFDWTKQLNE NRFDPLLIRS
PKVEGTGHNS IVKAPNAVDD WIVYHGRNAD DELYVGTEQR VMRIDPLYYA EGGLDTPGPT
AAAQSAPLYG TVHDDFADGL NAGWSVISGA AHTESDADGH ALVADESSVF IAVSGKSSAT
QVIDVWAKAP VTPLGARFGI VVRYQDVNNL TKLEVDAGRQ VISVVDVIGG VASERVTNAD
LHDFDSHAWH EYRLERRYCR LEIRIDGRFA ASCTISDKPG RAGLFSLRTG AAFSAYAATE
HVNLWGAGLR DLGRELHADR RLVIDGGVRP SGVCPVTLEL AYPLVSNRFV LDFAEQTSRG
QALLSLGEYR LSGTASSVEF MRNGKSLPST PEPARLRVFE DNVRRDRSGR AVLTIRIEAL
NGTMRLHLRG KTWQVPFTDN AARARITLDR ASLTGYERTS LESSIEERSA SGN
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