| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1291 |
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| Symbol | sphK1 |
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| ID | 6363109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1492206 |
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| End bp | 1493336 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642680473 |
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| Product | sphingosine kinase |
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| Protein accession | YP_001955234 |
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| Protein GI | 189440153 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA GTGAACGCAA CGAGCGCCGT CGCGTGGTGG CCATGGTGGG CAACCCCACT
TCCGATAAAG GCCGTGGCGC TAAGGTGGAC GCGCAGGTAT TGGGTCTGCT GGAGGAAGCC
GGCCGTGCCC ATAACTTCGA CGTCATCGAC ATCACCGGCA CGAGTTTCGA CGATTCCCTG
AACCAGGCGC GTGAACGCGC GCACGAGTAC GACTATCTCG TAGTGGTCGG TGGCGACGGC
ATGATCGCAC TTGGAGCGAA CGCCGTGGGC TGCAGTGGCA AGCCGTTGGG CATCGTGGCC
ACGGGGTCGG GCAACGATTT CGCACGAGGA CTGAAGCTGC CGGTCAACCG TATCGAAACC
GCAGTGGAAG GTATCGTCGG TGCTATCGTG CGCGGATCAC ACATCGATGT GGACATGGGA
CGCGTGACCT CTTTGGACGG CGGCTATGCC GTGGATCCCT CCACTGGCGA GGAGTACGAG
TACCAGGAGA GCAAGTCCGC CGAGCATCCG ATTGACCGGT ACTATGCGGG CATGCTGTCC
TGTGGTCTTG ACGCGAGCAT CAACGACCGT GCGAATCATT CGCATCTGCC GACCGGCACC
ATGCGCTACT TTGCGGCGGT GCTGGTGGAG CTGACGCATA TGAAGCGTTA TGGTTACCAC
ATCAAAGCCA CATTGGCGGA CGGGACCACG GATGAACGAG ACATCATCAC ACCATTGCTG
ACGATTGCGA ATTCGAGGCA TATCGGTGGC GGCATTGAGG TCTCGCCGTA CTCCTGCTTC
TCCGATGGAT TGTTGGACCT GGTGTGGATG GACCACGTGC CGAACTTCGG CGAATGCGCG
GTGGCCATTT CGAATGCCTA TAACGGCAAG CTACTTGCTT CAAAGGTGTT CGGCTGGAAA
CGTATCCGTG AAATCGAAGT CACGCGGGCA ACGGAAGGAG ACGAGCCGCC GGTGCTGATG
GCGGACGGCG AATATATCGG GCATTTGCCA TTTAGGGTAG TGGCCGAGGA CTGCGCGTTG
CGCGTGCTAG TGCCGCCGGC CGTAGCCGCC CGTGAGGTGG ATTCCCGACA GGAAGTGCTC
AACGCCATTG CCCGAGATGG TCGCGATCCC GTGACCGGCC AGTTCGCGTG A
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| Protein sequence | MSESERNERR RVVAMVGNPT SDKGRGAKVD AQVLGLLEEA GRAHNFDVID ITGTSFDDSL
NQARERAHEY DYLVVVGGDG MIALGANAVG CSGKPLGIVA TGSGNDFARG LKLPVNRIET
AVEGIVGAIV RGSHIDVDMG RVTSLDGGYA VDPSTGEEYE YQESKSAEHP IDRYYAGMLS
CGLDASINDR ANHSHLPTGT MRYFAAVLVE LTHMKRYGYH IKATLADGTT DERDIITPLL
TIANSRHIGG GIEVSPYSCF SDGLLDLVWM DHVPNFGECA VAISNAYNGK LLASKVFGWK
RIREIEVTRA TEGDEPPVLM ADGEYIGHLP FRVVAEDCAL RVLVPPAVAA REVDSRQEVL
NAIARDGRDP VTGQFA
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