Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1288 |
Symbol | recR |
ID | 6363490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1487703 |
End bp | 1488305 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642680470 |
Product | recombination protein RecR |
Protein accession | YP_001955231 |
Protein GI | 189440150 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTG CTTATGACGG CGCAATACAA CGACTGATCG ACGCTTTCGG GCGGCTGCCC GGCATCGGGC CGAAGGGCGC GCAGCGTATC GCCTTCTACA TGCTGTCCGC GCCCGAAGAT GAAGCGCGCG ATTTGGCCGA GGCCATCGAA GAGGTCAAGG CCAAGATCCG CTTCTGTGAT ATTTGCGGCA ACGTGTGCGA ATCCAGCCCC TGCCCGGTAT GCGCCGACCC GAGACGCGAC CGTTCGGTGA TCTGCGTGGT CGAAGAGCCC AAGGATGTGA TGAGCATCGA GCGCACGCGC GAATACCACG GCCTATACCA TGTGCTCGGC GGCGCAATCA ACCCAATGGC CAACGTTGGC CCTGCCGACC TGCGTATTCC CGGTCTGCTC AAACGCTTAG AAGGCGATGA GGTCAAGGAA GTGATTATGG CGCTCGACCC GAATATTGAA GGCGAGGCCA CCACCAGCTA CTTGACCCAG CTATTGCGAC CCGTAGGTGT CAAGGTCACC CGACTTGCCA GCGGCCTGCC GGTGGGCTCC GACTTGGAGT ATGCCGACGA AATCACGCTG GGCAGGGCAC TGGCCGGTCG GCGCGAGGCC TAA
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Protein sequence | MALAYDGAIQ RLIDAFGRLP GIGPKGAQRI AFYMLSAPED EARDLAEAIE EVKAKIRFCD ICGNVCESSP CPVCADPRRD RSVICVVEEP KDVMSIERTR EYHGLYHVLG GAINPMANVG PADLRIPGLL KRLEGDEVKE VIMALDPNIE GEATTSYLTQ LLRPVGVKVT RLASGLPVGS DLEYADEITL GRALAGRREA
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