Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1279 |
Symbol | leuA |
ID | 6363481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1476631 |
End bp | 1478547 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642680461 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001955222 |
Protein GI | 189440141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCAGG ATCAATCATC CGTTTTTGAT CTCGCAGCGG TAGCCGCAGC GTCCAATGGG GGGAACAACG ACCCGCTGCT GCCTCCGGCG CGATTCATCG GCGATCCGCA GAAGCCGAGT CGTATGCCGT ACAACAAGTA CGCCGCCTAC GACAAGCAGA TCCCGTTTGA TTACCCGGAG CGTACGTGGC CGGGCAAGCG ACTGCAGCGC GCGCCGCGCT GGTGCTCCGT CGATCTTCGC GACGGCAATC AGGCCCTCGT CAACCCGATG GATTCCGAGC GCAAGCTGCG TTTCTGGAAC CTGCTCGTCT CCATGGGATT CAAGGAGATC GAGGTGGGCT TCCCGTCCGC TTCCGAGACC GATTTCGACT TCATCCGTAT GCTCATCGAG CGTGAGCTGA TTCCGGACGA CGTGACCATC GTGGTACTCA CCCAGTGCCG CGAGCACCTC ATCCGCCGCA CTTACGAGGC GCTCAAGGGT GCCAAGCGCG CCATCGTGCA CTTCTACAAC TCCGTGTCTG TGTTGCAGCG CGAGGTCGTG TTCCGCAAGA ACAAGGAGGA GATCAAGAAG CTCGCCACCG ACGCCGCCGA ACTGTGCAAG GACCTCGAGA ACGAGGCCAA GGGCATCGAC CTGTACTACG AGTACTCGCC GGAATCCTTC ACCGGCACCG AGCCGGAGTA CGCCGTCGAG GTGTGCAACG CCGTGATCGG TGTTATCAAG CCGACTCCCG AGCACCCGAT GATCATCAAC CTGCCCGCCA CCGTGGAAAT GACCACGCCG AACGTGTTCG CCGACGAAGT GGAGTACGTC TCCACCCACC TCGACGACCG TGACTCCGTG GTGCTCTCCC TCCACCCGCA CAACGACGAA GGCATGGGCG TGGCCGCCAC CGAGCTGGCC GTGCTGGCCG GCGCCGACCG CGTGGAAGGC TGCCTGCTGG GCAACGGCGA GCGTACCGGC AACGTCGACT TGGTCACGCT GGGCCTCAAC TGGCTCACCC AAGGCATCGA CCCGCAGCTT GACCTGTCCA ACGTGCCCGA GATTCGCAAG ACGGTTGAGT ACTGCAACCA GATCAAGATT TCCGAGCGTC ACCCGTACGC CGGCAACTTC GTGTTCACTG CGTTCTCCGG CTCGCATCAG GACGCCATCA AGAAGGGTCT CGAGGCTCGT CAGGTGGCCG CCGAGCGTGC TGGCGCCGAT CTCGACAGCT TCGTGTGGCT TGTGCCGTAC CTGCCGATCG ACCCGAAGGA CATCGGCCGT ACGTACGAAG CCATCATTCG CGTCAACTCG CAGTCCGGCA AGGGCGGCAT GGCCTACCTG CTCAAGACCA ACCACAATCT TGACCTGCCC AAGCGTCTGC AGATCGAATT CGACAAGATC GTGCAGAACT ACGCTGACAC GACCAAGAAG GAAGTCAAGG ACGAGGATAT CTGGCGTCTG TTCAAGGACG AGTACCTGCC GGTCGAACAG TCCGGCATGA CCGCCGCCGG TGTGGTTGTG GGCGATACTC ATGACGCCTC GCTCGTGCCG TGGGGCCGCT TGAAGCTGCT CAAGGTGGCC GTCAGCTCCG GTGAGGATGG CTCCGACACC GTGCTCAAGG CTCGTCTGCT CGACCGCGGC GTGAACGTCG GGGTCGATGC GCCCGTGGAG CGCGAGGTCT CCGGCATCGG CAACGGTCCG ATCGCCGCTT TCCTCAACGC CATTTCCAAC TTTGGCGTTG ACGCCTCGAT TATGGATTAC GCGGAGCACA CCATGTCCGT CGGCACCGAC GCCATGGCCG CCTCGTACGT GGAATGCCAG GTCGGCGAGG CCGATGACGC GCAGATCGTG TGGGGCGTCG GCATCGATTC GTCGATTACC ACTAGCGCCC TGAAGTCGAT TATCTCCGCC ATCAACCGTT CCCAGCGCAA GCGCTGA
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Protein sequence | MGQDQSSVFD LAAVAAASNG GNNDPLLPPA RFIGDPQKPS RMPYNKYAAY DKQIPFDYPE RTWPGKRLQR APRWCSVDLR DGNQALVNPM DSERKLRFWN LLVSMGFKEI EVGFPSASET DFDFIRMLIE RELIPDDVTI VVLTQCREHL IRRTYEALKG AKRAIVHFYN SVSVLQREVV FRKNKEEIKK LATDAAELCK DLENEAKGID LYYEYSPESF TGTEPEYAVE VCNAVIGVIK PTPEHPMIIN LPATVEMTTP NVFADEVEYV STHLDDRDSV VLSLHPHNDE GMGVAATELA VLAGADRVEG CLLGNGERTG NVDLVTLGLN WLTQGIDPQL DLSNVPEIRK TVEYCNQIKI SERHPYAGNF VFTAFSGSHQ DAIKKGLEAR QVAAERAGAD LDSFVWLVPY LPIDPKDIGR TYEAIIRVNS QSGKGGMAYL LKTNHNLDLP KRLQIEFDKI VQNYADTTKK EVKDEDIWRL FKDEYLPVEQ SGMTAAGVVV GDTHDASLVP WGRLKLLKVA VSSGEDGSDT VLKARLLDRG VNVGVDAPVE REVSGIGNGP IAAFLNAISN FGVDASIMDY AEHTMSVGTD AMAASYVECQ VGEADDAQIV WGVGIDSSIT TSALKSIISA INRSQRKR
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