Gene BLD_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1279 
SymbolleuA 
ID6363481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1476631 
End bp1478547 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content62% 
IMG OID642680461 
Product2-isopropylmalate synthase 
Protein accessionYP_001955222 
Protein GI189440141 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00970] 2-isopropylmalate synthase, yeast type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAGG ATCAATCATC CGTTTTTGAT CTCGCAGCGG TAGCCGCAGC GTCCAATGGG 
GGGAACAACG ACCCGCTGCT GCCTCCGGCG CGATTCATCG GCGATCCGCA GAAGCCGAGT
CGTATGCCGT ACAACAAGTA CGCCGCCTAC GACAAGCAGA TCCCGTTTGA TTACCCGGAG
CGTACGTGGC CGGGCAAGCG ACTGCAGCGC GCGCCGCGCT GGTGCTCCGT CGATCTTCGC
GACGGCAATC AGGCCCTCGT CAACCCGATG GATTCCGAGC GCAAGCTGCG TTTCTGGAAC
CTGCTCGTCT CCATGGGATT CAAGGAGATC GAGGTGGGCT TCCCGTCCGC TTCCGAGACC
GATTTCGACT TCATCCGTAT GCTCATCGAG CGTGAGCTGA TTCCGGACGA CGTGACCATC
GTGGTACTCA CCCAGTGCCG CGAGCACCTC ATCCGCCGCA CTTACGAGGC GCTCAAGGGT
GCCAAGCGCG CCATCGTGCA CTTCTACAAC TCCGTGTCTG TGTTGCAGCG CGAGGTCGTG
TTCCGCAAGA ACAAGGAGGA GATCAAGAAG CTCGCCACCG ACGCCGCCGA ACTGTGCAAG
GACCTCGAGA ACGAGGCCAA GGGCATCGAC CTGTACTACG AGTACTCGCC GGAATCCTTC
ACCGGCACCG AGCCGGAGTA CGCCGTCGAG GTGTGCAACG CCGTGATCGG TGTTATCAAG
CCGACTCCCG AGCACCCGAT GATCATCAAC CTGCCCGCCA CCGTGGAAAT GACCACGCCG
AACGTGTTCG CCGACGAAGT GGAGTACGTC TCCACCCACC TCGACGACCG TGACTCCGTG
GTGCTCTCCC TCCACCCGCA CAACGACGAA GGCATGGGCG TGGCCGCCAC CGAGCTGGCC
GTGCTGGCCG GCGCCGACCG CGTGGAAGGC TGCCTGCTGG GCAACGGCGA GCGTACCGGC
AACGTCGACT TGGTCACGCT GGGCCTCAAC TGGCTCACCC AAGGCATCGA CCCGCAGCTT
GACCTGTCCA ACGTGCCCGA GATTCGCAAG ACGGTTGAGT ACTGCAACCA GATCAAGATT
TCCGAGCGTC ACCCGTACGC CGGCAACTTC GTGTTCACTG CGTTCTCCGG CTCGCATCAG
GACGCCATCA AGAAGGGTCT CGAGGCTCGT CAGGTGGCCG CCGAGCGTGC TGGCGCCGAT
CTCGACAGCT TCGTGTGGCT TGTGCCGTAC CTGCCGATCG ACCCGAAGGA CATCGGCCGT
ACGTACGAAG CCATCATTCG CGTCAACTCG CAGTCCGGCA AGGGCGGCAT GGCCTACCTG
CTCAAGACCA ACCACAATCT TGACCTGCCC AAGCGTCTGC AGATCGAATT CGACAAGATC
GTGCAGAACT ACGCTGACAC GACCAAGAAG GAAGTCAAGG ACGAGGATAT CTGGCGTCTG
TTCAAGGACG AGTACCTGCC GGTCGAACAG TCCGGCATGA CCGCCGCCGG TGTGGTTGTG
GGCGATACTC ATGACGCCTC GCTCGTGCCG TGGGGCCGCT TGAAGCTGCT CAAGGTGGCC
GTCAGCTCCG GTGAGGATGG CTCCGACACC GTGCTCAAGG CTCGTCTGCT CGACCGCGGC
GTGAACGTCG GGGTCGATGC GCCCGTGGAG CGCGAGGTCT CCGGCATCGG CAACGGTCCG
ATCGCCGCTT TCCTCAACGC CATTTCCAAC TTTGGCGTTG ACGCCTCGAT TATGGATTAC
GCGGAGCACA CCATGTCCGT CGGCACCGAC GCCATGGCCG CCTCGTACGT GGAATGCCAG
GTCGGCGAGG CCGATGACGC GCAGATCGTG TGGGGCGTCG GCATCGATTC GTCGATTACC
ACTAGCGCCC TGAAGTCGAT TATCTCCGCC ATCAACCGTT CCCAGCGCAA GCGCTGA
 
Protein sequence
MGQDQSSVFD LAAVAAASNG GNNDPLLPPA RFIGDPQKPS RMPYNKYAAY DKQIPFDYPE 
RTWPGKRLQR APRWCSVDLR DGNQALVNPM DSERKLRFWN LLVSMGFKEI EVGFPSASET
DFDFIRMLIE RELIPDDVTI VVLTQCREHL IRRTYEALKG AKRAIVHFYN SVSVLQREVV
FRKNKEEIKK LATDAAELCK DLENEAKGID LYYEYSPESF TGTEPEYAVE VCNAVIGVIK
PTPEHPMIIN LPATVEMTTP NVFADEVEYV STHLDDRDSV VLSLHPHNDE GMGVAATELA
VLAGADRVEG CLLGNGERTG NVDLVTLGLN WLTQGIDPQL DLSNVPEIRK TVEYCNQIKI
SERHPYAGNF VFTAFSGSHQ DAIKKGLEAR QVAAERAGAD LDSFVWLVPY LPIDPKDIGR
TYEAIIRVNS QSGKGGMAYL LKTNHNLDLP KRLQIEFDKI VQNYADTTKK EVKDEDIWRL
FKDEYLPVEQ SGMTAAGVVV GDTHDASLVP WGRLKLLKVA VSSGEDGSDT VLKARLLDRG
VNVGVDAPVE REVSGIGNGP IAAFLNAISN FGVDASIMDY AEHTMSVGTD AMAASYVECQ
VGEADDAQIV WGVGIDSSIT TSALKSIISA INRSQRKR