Gene BLD_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1263 
Symbol 
ID6362887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1454904 
End bp1456085 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content63% 
IMG OID642680445 
Producthypothetical protein 
Protein accessionYP_001955206 
Protein GI189440125 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATC CCAACAATGT GCCTTTGCCT CAGCAGCCTG AGGCCAACGG TACGCCCACA 
CCTAATCCCG TACCGCAGTA TGGCGCACCG GCCCCGGCGC AGCCCTCACA GCCGGCGCAG
CCCGCTTACG GACAGCCGGC ATACGGTCAG CCTGCTCCGA CCGCGAACTC TTATGGCCAG
GCCGTACCAA CCTACGGTCA GCCCGCGCCC GACGCCAACA CCTACGGTCA ATCCGCACCG
GCGTACGGCA CACCGGCCCC CGATGGCAAT CCTTACGGCC CGGTTCCGCC GTCTTACGGC
CAATACGCCG CGCCCACTGC CACTGTGCCG CTGGATAAGC CTTACTACGG ATGCTCCTTC
CAAGAAGCCT TCCTGCGCTT CTGGAAGAAG TACACGGTGT TCAAGGGCCG CGCGTCCCGC
AGTGAATTCT GGTGGTGGGT GCTGGCCGCT TTCGGCATCA ATATAGTGCT GGACATCCTC
AACACCGCCA CAGATGAAAA GCTTGGCTTC CTCGCCACCA TTTGGGGTCT GGTGACCCTA
ATCCCCACCC TGGCACTTTC CGTCCGCCGT CTGCATGACA CGAACAAGCC TGGCTGGTGG
GTTGCCATTT TCTATATCGC GATGGTTATC GGCCTTATCA TCATGATTAT CGGCGGTGGT
GCGGCACTGT ACGGCGGGTT CAGGAGCCTT GGCAGTTATG ACTATGGTTA TGGCAGCATG
GCCGCCGGCG GTCTTGGCGC GGCGGTCATT GGTGCGTTGA TTACGCTGGC CGGCTGCGTT
GTCTATATCG TGTTCATGGC TCTTCCCAGC AAGCCGGAGG GCGCACGTTT TGACGATGGC
GCGGCGGCAA CCCCCATGCC TCAGGGTGCT TACGGCGCAC CATACAGCAC GCCTGTACCC
CCGAATTTCG CCGCTCCGAA CGCGCCCGCA CCCGGCTTCA ACCAGCCGGC CCCGGCTTAC
GGCCAGCCGC CCATGCCAAC CCCCGACTAT GGCCAGCCGG CTGCACCCGC ACCTGATTAC
GGTCAGGTGC CGGCCCCGCA GTACGGCCAA CCGGAGGCCC CGGCCCCACA GTACGGCCAG
GTTCCGCCGA TGCCTCAAAA CGCCGGCGAC GAATCCGCAA CACCTTCTGA GCACACGGCT
CCCGCCGGCG ACAATGCCCA GAAACCCTGG CAAGGCCAGT AA
 
Protein sequence
MSDPNNVPLP QQPEANGTPT PNPVPQYGAP APAQPSQPAQ PAYGQPAYGQ PAPTANSYGQ 
AVPTYGQPAP DANTYGQSAP AYGTPAPDGN PYGPVPPSYG QYAAPTATVP LDKPYYGCSF
QEAFLRFWKK YTVFKGRASR SEFWWWVLAA FGINIVLDIL NTATDEKLGF LATIWGLVTL
IPTLALSVRR LHDTNKPGWW VAIFYIAMVI GLIIMIIGGG AALYGGFRSL GSYDYGYGSM
AAGGLGAAVI GALITLAGCV VYIVFMALPS KPEGARFDDG AAATPMPQGA YGAPYSTPVP
PNFAAPNAPA PGFNQPAPAY GQPPMPTPDY GQPAAPAPDY GQVPAPQYGQ PEAPAPQYGQ
VPPMPQNAGD ESATPSEHTA PAGDNAQKPW QGQ