| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1245 |
|---|
| Symbol | |
|---|
| ID | 6363586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1427410 |
|---|
| End bp | 1428696 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642680423 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001955188 |
|---|
| Protein GI | 189440107 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4905] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAT TCAAGGACGA TGGCACGGCC ACTACCCTCG GCAAGCCGCG GGAGAACCGT
GACGCCGAGT CCGCAGTCGT GGCCGATCTG GTGGCCGTCG AACTGGACGA AGCCGGCTTG
AACCTGAACA CCAAGCGATT ACCGATTCTG GCGCGCATCT ATGGCGCGGT CGTGCTGCTG
GACGGACTCG CCACATTGCC GATTATGGTG ATTTCCATCC TCTATGCCGT GCGCGAGATT
CTGGATGGTC ATGTGCACGT CGATGCGATG AGCCTGACCT TCATCCTGTC CGCGATTCAT
GCGGTGGTGC TGGTAGTCAG TGCCGCATGC CTGATTGTGT TCGGCGTGAT GCTGCTGCGC
AATCATCGCC GGTATGCCGC GCGCTGGACC TACGTGCTGA TGCCGTTGAC GTTGGCCGAC
GGCATGCTGT CGCTGGCCCT GACCGGCCTT GGCTTCAACC TGCTGCTGCC GCTGATTCAG
ATGATTATTC TCGTCGTGAT TTCGGTGACC GCCGATCCCT CCCTGAGCGA GGAACGCCGT
CTGCAGCGCG CGCTCAGGCG TATGGACGAT CGCGATGATT ATGAATCGGC TGTGGCGGCC
GGCATGCTAG GCCGCGACCA GTCCGGCAAG GGCTATATTG CGCTGGACTT CTTCAATATC
TTCTGGCTGT TTACCATCGC TTCGGTGGGT GGCCTGATTG TGGAGACGAT CTACCATATG
GCGCTGTATA ACGGTGAACT TCAGGACCGC GCTGGTTTGC TGTGGGGCCC GTTCTCGCCG
ATTTACGGCT GTGGTGCGGT ATTGGTAACC GTGTGCCTGA ATCGCCTGTG GAAGGCGAAT
CCGTTCTTGA TTTTCTGCGC TTCGGCGGTG ATCGGCGGCG CGTTCGAATA TTGCACCAGC
TGGTTCATGG AAGCGGCGTT TGGTATTACC GCGTGGGATT ACACCGGCCG TTGGCTGTCC
ATCGACGGAC GTACTTCGGG CCAATTCATG TTCTTCTGGG GACTGATTGG TGTGGTGTGG
GTCAAGTGGC TGTTACCGCG ACTGCTGGCT CTGATTAATC GCATTCCATG GAAAGTGCGG
TATTCGCTGA CTGCGGTATG CACGGTGCTG ATGGTGATCG ACATTGCCTT CACGCTGATG
GCCTTGGATT GCTGGTATGG GCGCATGGCC GGCCAGCCGC AGGATTCACC GGTCGCGATG
TGGTTCAGCG AACGCTACAG CGACGCTTAC ATGGCCAATC GCTTCCAGAC CATGCATATC
GACCCTTCCA AGGCCGGGCG TATGTGA
|
|---|
| Protein sequence | MVEFKDDGTA TTLGKPRENR DAESAVVADL VAVELDEAGL NLNTKRLPIL ARIYGAVVLL
DGLATLPIMV ISILYAVREI LDGHVHVDAM SLTFILSAIH AVVLVVSAAC LIVFGVMLLR
NHRRYAARWT YVLMPLTLAD GMLSLALTGL GFNLLLPLIQ MIILVVISVT ADPSLSEERR
LQRALRRMDD RDDYESAVAA GMLGRDQSGK GYIALDFFNI FWLFTIASVG GLIVETIYHM
ALYNGELQDR AGLLWGPFSP IYGCGAVLVT VCLNRLWKAN PFLIFCASAV IGGAFEYCTS
WFMEAAFGIT AWDYTGRWLS IDGRTSGQFM FFWGLIGVVW VKWLLPRLLA LINRIPWKVR
YSLTAVCTVL MVIDIAFTLM ALDCWYGRMA GQPQDSPVAM WFSERYSDAY MANRFQTMHI
DPSKAGRM
|
|---|
| |