| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1223 |
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| Symbol | |
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| ID | 6363859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1401285 |
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| End bp | 1402607 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642680400 |
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| Product | transposase |
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| Protein accession | YP_001955166 |
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| Protein GI | 189440085 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGT ATGAGGCCGT CAGGATTCGG CTCGACCCAA CCCCACGGCA GACACGGCTG
TTGGAGTCCC ATGCGGGTGG TGCGCGCTTC GCGTACAATC TGATGCTCGC GCACGTCCGG
CGCCAAATCT CCTTGGGTGA GAAACCGGAC TGGACGTTGT ACGCGATGCG CCGCTGGTGG
AACGAGTGGA AGGACGAAAT CGCCCCGTGG TGGCGAGAGA ACAGCAAGGA GGCGTACGGC
AGCGCGTTTG AATGGCTGTC CCAGGCGTTG AGGAACTGGT CGGACAGCAG GAAGGGCAGG
CGCGCGGGCC GTAGGGTGGG CTGGCCGAAA TACAAGTCGA AACGCTCCAG CGTCCCGCGT
TTCGCATACA CGACCGGCAG CTTCGGCCTT ATCGAGGACG ACCCGAAGGC GTTGAAACTG
CCACGCATCG GACGCGTGCA CTGCATGGAG AACGCCACCG AACGCGTCCA CGGCAGACGA
ATCGTGCGCA TGACCGTCAG CCGACATGCG GGCTTCTGGT ATGCGGCCCT CACCGTCGAA
CGTCCCACCG AAAGCGTTCC AGCGAAAAAC AGAAAACAGA AGAACCATGA TCGTCGGGTC
GGCGTGGATT TGGGCGTCAG GACCCTCGCC ACCCTCTCGG ATGGCACCAC GTTCCCCAAT
CCACGCAACT ACGTCCGCAC GCAACGGAAA CTCCGCCACG CCCAACAGTC GTTGAGCCGC
CGCGATAGGG GCATGAGCCA TGGATGCGGG TCGAAACGGT ACAACAGGGC GTTGGGGCGT
GTGCGCCGAA TCCACGCTCG CATAGCCGCC CAACGAGCCG ACAACATCGG CAAGCTCACC
ACGTGGCTTG CCGACAATTA TTCCGACATC AGCATCGAGG ACCTCAACGT GCAGGGCATG
AGCCATAACA GGAGGCTTGC CAAACACGTA CTGGACGCGG ACTTCCACGA GTTCCGCCGC
CAACTGGAAT ACAAGACCGC ACGCGCCGGC ACGAGGCTCC ATGTCATCGA CCGCTGGTAT
CCAAGCTCGA AGACCTGTTC GAACTGCGGG ACGGTGAAAG CCAAACTGTC CCTGTCCGAG
CGCGTCTACC ATTGCGGCAA GTGCGGACTT GTCATCGACC GTGATGTGAA CGCGGCCGTC
AACATCCAAG TCGCCGGGAG TGCCCCGGAG ACGTTAAACG CGCGTGGAGG AAGCGGAAGA
CAGACCCGCC TTGAGTGCGG GACAATGCGG CATCCGGCGA AACGCGAACC AAGCGGCGGC
GACAGTCGCG TGAGACTTGG AGCTGGTCTC GGCAACGAGG CCATGCAGAT GACTTCGCTC
TAG
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| Protein sequence | MSAYEAVRIR LDPTPRQTRL LESHAGGARF AYNLMLAHVR RQISLGEKPD WTLYAMRRWW
NEWKDEIAPW WRENSKEAYG SAFEWLSQAL RNWSDSRKGR RAGRRVGWPK YKSKRSSVPR
FAYTTGSFGL IEDDPKALKL PRIGRVHCME NATERVHGRR IVRMTVSRHA GFWYAALTVE
RPTESVPAKN RKQKNHDRRV GVDLGVRTLA TLSDGTTFPN PRNYVRTQRK LRHAQQSLSR
RDRGMSHGCG SKRYNRALGR VRRIHARIAA QRADNIGKLT TWLADNYSDI SIEDLNVQGM
SHNRRLAKHV LDADFHEFRR QLEYKTARAG TRLHVIDRWY PSSKTCSNCG TVKAKLSLSE
RVYHCGKCGL VIDRDVNAAV NIQVAGSAPE TLNARGGSGR QTRLECGTMR HPAKREPSGG
DSRVRLGAGL GNEAMQMTSL
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