Gene BLD_1218 details

Gene Information

• Locus tag: BLD_1218
• Symbol: ssb2
• ID: 6363854
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: -
• Start bp: 1397136
• End bp: 1397792
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642680395
• Product: single-stranded DNA-binding protein
• Protein accession: YP_001955161
• Protein GI: 189440080
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGTG AAACCGTCAT CACCATCGTG GGCAACCTCA CTGCGGACCC CGAGCTGCGC 
ACTATTGGCA GCGGTGCGAC CGTGGCGAGC TTCACGATTG CTTCCACCCC GCGAACCTGG 
AATCGTCAGA CCAACCAGTT CGAGGATGGT CAGGCGCTGT TCATGAGGTG CTCCGCTTGG 
CGTGATCTGG CCGACCACTG CGCCCAGTCC CTGAAGAAGG GCATGCGCGT GATTGCCACC 
GGTCGCCTCC AGCAGCGTTC CTATCAGGCA CAGGATGGTT CCCAGCGAAC CGTCGTGGAG 
ATGCAGCTCG ATGAGATCGG GCCCTCCCTG CGCTACGCCA CCGCACAGGT GACTCGCCAG 
TCGTCCGGTC AGGGCGGCTT CCAGGGTCGT TCCGGTGGTT TCCAGGGTGG TCAGCAGTCC 
AATCAGGGCT ATGGCAACCA GGGTGGCCAA GGTGGTTATG CCGGTGGCCA GGGCGGTTAC 
AACGGTGGCT ATCAGGGTGG TGGCGCTGGA TACTCCCAGC AGTCTGCCGC TCCCGCCAAC 
CCGTCCGCTC CTGCGGTCGA CCCGTGGAGT AATGCCGGTG CATCTGATGC CGGTAGCTTC 
TCCACGTTCG GCGCTTCCTC CGATTTCGGC GGCGACGATT CCGACCCGGA GTTCTGA 

 

Protein sequence

MAGETVITIV GNLTADPELR TIGSGATVAS FTIASTPRTW NRQTNQFEDG QALFMRCSAW 
RDLADHCAQS LKKGMRVIAT GRLQQRSYQA QDGSQRTVVE MQLDEIGPSL RYATAQVTRQ 
SSGQGGFQGR SGGFQGGQQS NQGYGNQGGQ GGYAGGQGGY NGGYQGGGAG YSQQSAAPAN 
PSAPAVDPWS NAGASDAGSF STFGASSDFG GDDSDPEF