| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1190 |
|---|
| Symbol | dexA |
|---|
| ID | 6364160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1361454 |
|---|
| End bp | 1363694 |
|---|
| Gene Length | 2241 bp |
|---|
| Protein Length | 746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642680366 |
|---|
| Product | trehalose-6-phosphate hydrolase |
|---|
| Protein accession | YP_001955133 |
|---|
| Protein GI | 189440052 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG TACAACATCG CGCGACCACG CGCACTAGTA ATACCGATAA CAGCACCACG
AAAACGAAGT CAAAGGCGAC TTCTGCCCGA AAGAGCCCCG CAACCAAGCG CAAGAGAGTC
AGCGCCGAAA CGGCACGCGC CGCAGCAGCG CTGAAAGGCC TGGCTGTCGA AGCCCCCGCA
CCGTCCATCG AAGCAAACGA GCCCGGCCAG TTCGGCCGCA TCAATGTCAT GGACATCACT
CCCGCCGAGG AGCGCGGCAT CTTCCCCGCC CGTGTGGAAC TCGGCGAACC GTTTGAGATG
ACCGCCCAGG TGTTCATCGA AGGCCGTACC AAGGTGGGTG CCACCGCCAT CGTGCGCAAC
CCGCGCGGCA AGGAAACCAT GCGCCGGGCC ATGACCTGCG TAAATCCCGG CCTCGATCGT
TGGACCGTGA TGGTCAAGTG CGGCGAGCAC AGCGATCTGA AGCCTTGGGA GGATGGCTAC
GCGGCCGTCA AGCGTCAGCT CGGCGAATGG ACCGTGACCA TCGAAGGTTG GGAAGACGCG
TACGTCTCCT GGCTGCACGA CGCCCGCATC AAGGTGCGTG TGATGGACGA CGTGGACAAC
GCACTCAATT CCGGTGCCGA GTTGCTGGCC CGTTGGGCCG CAACCCCGGA CGCCGGCCTG
ACCGCACGCG ATCGCAAGAC CTTGGAGAAG GCCGCTGAGA CCATGGCCGA TCAGACGCTG
AGCGCCGAGG ATCGTCTCGC CGCCGGCGAC AACCCGACCA TCGCCGCCCT GCACGAGACT
CACCCGCTGC GCGACGGCAT CTCCCCCAGC CAGCCCCAGC GCTTCAAGGT GGAACGCCCG
AAGTCCAGCT TCGCGGCTTG GTACCAGTTC TTCCCGCGTT CCGAAGGCGC CACCATCGAT
CCGAACACCG GCAAGATCAT TCAGGGTACG CTGAAGACTT CGATGGCCGG CCTCGAACGC
GCCGCTGCCG AGGGCTTCGA CATCGTCTAC CTGCCGCCGG TCTTCCCGAT TGGCGTGACC
AACCGCAAGG GCCGCAACAA CACGCTGGTC GCCGGCCCCG ATGACCCGGG CTCCCCGTTC
GGCATCGGCT CCGAGCTAGG TGGCCACGAC ACCGTGGATC CGCTGCTCGG CACCATGGAC
GATTTCAAGG CCCTGTGCCA GCGTGCACAT GAACTGGGTC TGGAAATCGC GCTTGATTTC
GCCCTGCAGT GCTCGCCCGA TCACCCGTGG GTCAAGGCCC ACCCGAACTG GTTCCGCCAC
AAGCCGGACG GCTCCATCGC CTTCGCCGAG AACCCGCCGA AGAAGTATCA GGACATCTAC
CCGATCGACT TCAACGCCGA CATGCCCGGC ATCGAAAAAG AAGTCGAACG CATCATGAAT
CTGTGGATCG AGGCGGGCGT CACCATCTTC CGCATCGATA ACCCGCACAC CAAGCCGGTG
CGTTTCTGGC AGGACGTGAT TGCCGCCGTG ACCAAGAAGC ACCCGGAGAT CCTGTTCTTG
GCCGAGGCAT TCACCCGCCC GGGCATGATG CGCGCCCTAA GCTACGTGGG CTTCACCCAG
TCCCACTGCT ACTTCCCGTG GCGCAACACC AAGGACGAAC TGGAAGAGTA TCTGCCGGTC
ACCAATGGCG ACGACGGCTA CTACCAGCAC AACACCTTCT GGCCCACCAC GCCGGATATT
CTCACCGCTT ACGTGCGAGA CAACGGCGTA GCCGGCCACT GCGTGCGTGC GGTGCTGGCA
GCCATGGGCT CGCCGTCCTG GGGTATCTAC AACGGTTACG AACTCATCGA GAACAAGCAG
CGCCCCGGCT TCGAAGAGCA GATCGACAAC GAGAAGTACG AGGTCAAGGT TCGCGATTGG
AGCAAGGCCA AGCAGTACGG CGTGGCCAAG ATGCTCACCG CACTCAACAA GATTCGTCGC
GCCCACCCGG CCGCGTTGAG CTACCACAAC CTCACCGTGC TGCCTACGTC CGACCCGAAT
ATTCTGGCTT TCGCACGCCA CACGCCGGCC GAACTGACCG GTACCGGCCA AGCGGACACG
CTGATTGTGG TCGTGAACCT CGATGGACAC AACGCACACC AGTCGATGAT TCACCTGGAA
CTCAGCGAGC TGGGTCTGCC CACCGACCGC CCGCTCAACG TGCGCGACGA GCTGACCGGC
CGCGAATTCC AGTGGGGTTG GGACAACTAC GTGTCTCTGG CTCCTTGGGC GGATGTGGCC
CACATCCTGT CCGTGCAGTG A
|
|---|
| Protein sequence | MAAVQHRATT RTSNTDNSTT KTKSKATSAR KSPATKRKRV SAETARAAAA LKGLAVEAPA
PSIEANEPGQ FGRINVMDIT PAEERGIFPA RVELGEPFEM TAQVFIEGRT KVGATAIVRN
PRGKETMRRA MTCVNPGLDR WTVMVKCGEH SDLKPWEDGY AAVKRQLGEW TVTIEGWEDA
YVSWLHDARI KVRVMDDVDN ALNSGAELLA RWAATPDAGL TARDRKTLEK AAETMADQTL
SAEDRLAAGD NPTIAALHET HPLRDGISPS QPQRFKVERP KSSFAAWYQF FPRSEGATID
PNTGKIIQGT LKTSMAGLER AAAEGFDIVY LPPVFPIGVT NRKGRNNTLV AGPDDPGSPF
GIGSELGGHD TVDPLLGTMD DFKALCQRAH ELGLEIALDF ALQCSPDHPW VKAHPNWFRH
KPDGSIAFAE NPPKKYQDIY PIDFNADMPG IEKEVERIMN LWIEAGVTIF RIDNPHTKPV
RFWQDVIAAV TKKHPEILFL AEAFTRPGMM RALSYVGFTQ SHCYFPWRNT KDELEEYLPV
TNGDDGYYQH NTFWPTTPDI LTAYVRDNGV AGHCVRAVLA AMGSPSWGIY NGYELIENKQ
RPGFEEQIDN EKYEVKVRDW SKAKQYGVAK MLTALNKIRR AHPAALSYHN LTVLPTSDPN
ILAFARHTPA ELTGTGQADT LIVVVNLDGH NAHQSMIHLE LSELGLPTDR PLNVRDELTG
REFQWGWDNY VSLAPWADVA HILSVQ
|
|---|
| |