| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1123 |
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| Symbol | atpD |
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| ID | 6364632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1312755 |
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| End bp | 1314227 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642680298 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001955067 |
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| Protein GI | 189439986 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACA ACCAGACCAC TGCGGCCGAG CCTACCAACG GTCGCGTCAC CCGCGTCCAG
GGCTCGGTTA TCGACGTTGA ATTCCCGGTG GGTCATCTGC CCGACATCTA CAACGCCCTG
AAAGTAACGA TCGTCAACAC CAGCGCCAAG GAAGAAGGCG AGGCGAAGGA GACCGAGATC
ACCCTCGAGG TCGAACAGCA CCTCGGTGAT TCCACGGTCC GTTGCGTCGC TCTGAAGCCC
ACCGACGGCC TGGTTCGTGG TGCCTCCGTC TCCGACACCG GCGCCCCGAT CTCCGTGCCG
GTCGGCGACG TGACCAAGGG CCACGTCTTC GACGTGTCCG GTAACATCCT CAACAAGAAG
CCGGATGAGA CCATCACCGT CTCCGAGCGT TGGCCTATCC ACCGCAACCC GCCGGCCTTC
GATCAGCTGG AGTCCAAGAC CCAGATGTTC GAAACGGGCA TCAAGGTCAT CGATCTGCTG
ACCCCGTACG TGCAGGGCGG CAAGATCGGT CTGTTCGGTG GTGCAGGTGT GGGCAAGACC
GTGCTGATTC AGGAAATGAT TCAGCGCGTG GCCCAGAACC ACGGTGGTGT GTCCGTGTTC
GCTGGCGTCG GCGAGCGTAC CCGTGAGGGT AACGATCTGA TCGGCGAAAT GGCCGAGGCC
GGCGTGCTTG AGAAGACCGC ACTGGTCTTC GGCCAGATGG ATGAGCAGCC GGGTACCCGT
CTGCGTGTCC CGCTGACCGC ACTGACCATG GCAGAGTACT TCCGTGACGT GCAGAACCAG
GACGTGCTGC TGTTCATCGA CAACATCTTC CGCTTCACCC AGGCCGGTTC CGAGGTGTCC
ACCCTGCTGG GGCGTATGCC TTCCGCCGTG GGTTACCAGC CGAACCTGGC CGATGAGATG
GGTTCCCTCC AGGAGCGCAT CACCTCGACC CGTGGTCACT CGATCACCTC GTTGCAGGCC
ATTTACGTGC CGGCCGATGA TTACACCGAC CCGGCCCCGG CCACGACCTT CGCCCACTTG
GATGCAACCA CCGAGCTTTC TCGTGACATT GCCTCCAAGG GTATCTACCC GGCTGTGGAC
CCGCTGAGCT CCACCTCGCG AATCCTCGAT CCGCGTTACG TGGGCCAGGC TCACTACGAC
TGCGCCAACC GCGTCAAGGC GATTCTGCAG CGTAACAAGG AGCTGCAGGA CATCATCGCC
CTGATCGGTA TCGACGAGCT CGGCGAAGAG GACAAGACCA CCGTGAACCG TGCTCGTAAG
ATCGAGCAGT TCCTCGGCCA GAACTTCTAT GTGGCTGAGA AGTTCACCGG TCGCCCCGGC
TCCTACGTGC CGGCCGACGA GACCATCGAA GCCTTCACCC GCATCTGCGA CGGCGTGTAC
GACGACGTCC CGGAGCAGGC GTTCTCCGGC ATCGGCGGCA TCGACGACCT CGAAGAGAAG
TGGCACAACA TGCAGAAGGA ACTGGGTGCG TGA
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| Protein sequence | MADNQTTAAE PTNGRVTRVQ GSVIDVEFPV GHLPDIYNAL KVTIVNTSAK EEGEAKETEI
TLEVEQHLGD STVRCVALKP TDGLVRGASV SDTGAPISVP VGDVTKGHVF DVSGNILNKK
PDETITVSER WPIHRNPPAF DQLESKTQMF ETGIKVIDLL TPYVQGGKIG LFGGAGVGKT
VLIQEMIQRV AQNHGGVSVF AGVGERTREG NDLIGEMAEA GVLEKTALVF GQMDEQPGTR
LRVPLTALTM AEYFRDVQNQ DVLLFIDNIF RFTQAGSEVS TLLGRMPSAV GYQPNLADEM
GSLQERITST RGHSITSLQA IYVPADDYTD PAPATTFAHL DATTELSRDI ASKGIYPAVD
PLSSTSRILD PRYVGQAHYD CANRVKAILQ RNKELQDIIA LIGIDELGEE DKTTVNRARK
IEQFLGQNFY VAEKFTGRPG SYVPADETIE AFTRICDGVY DDVPEQAFSG IGGIDDLEEK
WHNMQKELGA
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