| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1120 |
|---|
| Symbol | fkpA2 |
|---|
| ID | 6364629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1310590 |
|---|
| End bp | 1311558 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642680295 |
|---|
| Product | FKBP-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_001955064 |
|---|
| Protein GI | 189439983 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCTC CCCTCGGCAA GGCCGTTGCC CTTGCCTGCT CGCTGGCGAT GTGCGTGTCG
CTGGCTGCCT GCTCCAGTTC GAGCTCGGAC TCGAAATCCT CTTCTTCCGA TTCCTCTTCA
TCTTCCGACT CTTCTGACAA GAAGGGCCAA ATTGCCGGCG TGACCGCCAA GGGCAAGCTC
GGCGAGAAGC CGACCATCTC CTTTAATACG CCGATGACCG TGTCCGACGG CTCTTATGTG
GTGCTGCAGA AGGGCGATGG CGACGTGATC GAGGAGGGCG ACCGCGTCTG CGCCCAAGGC
ATCGCGCTCA ACGTTAAAGA CGGAACCGAG CTCATGGACA CCTGGACCAA GAACACGCCG
GATTGCTCGC TGAAGGTGGA TTCCAAGACC CTCTCCTCGA CCTACTACAA CCAGATCAAG
GGTGCCAAGA TCAACACCAC GATTGGCTTT GGCGTCAACG CTCAGGATTC GTCCGGGTAC
TCTTACATTC TGGCGATGAC GTTTGTGTCC AAGTCCAAGG ACTTGGAGAA GGCCACTGGC
GAGGAAGTCA AGGATGTGCC GGCCAATCTG CCGAAGGTGA CGCGAGCCAA AAACGGCGAG
CCGTCCATCG ACATGAACGG TCAGGGTTCG GTTGATTCGC TGATCTCGCA GACGCTGATC
AAGGGTAACG GCGCCAAGCT GACCGACAAG AACACCGTGG TGGTCAAGTA CACCGGTTGG
CTTACGAATG GCAAGCAGTT CGATTCGTCC TGGGATCGCG ATTCCACAAT CGACGCCGAT
CTGTTCAGCG ATTCCAGCGG CCAGCATCAG GTTATCGAGG GCTGGCAGAA GGGTCTGGTC
GGCCAGACCG TCGGCTCTCA GGTTCTGCTG GTGATTCCGC CGGATCAGGC CTATGGAGAT
AAGGAGCAAG GTCCGATTCC CGCCAACTCC ACGTTGGTCT TCGTAATCGA TATTCTCGCC
GCGTACTAA
|
|---|
| Protein sequence | MLSPLGKAVA LACSLAMCVS LAACSSSSSD SKSSSSDSSS SSDSSDKKGQ IAGVTAKGKL
GEKPTISFNT PMTVSDGSYV VLQKGDGDVI EEGDRVCAQG IALNVKDGTE LMDTWTKNTP
DCSLKVDSKT LSSTYYNQIK GAKINTTIGF GVNAQDSSGY SYILAMTFVS KSKDLEKATG
EEVKDVPANL PKVTRAKNGE PSIDMNGQGS VDSLISQTLI KGNGAKLTDK NTVVVKYTGW
LTNGKQFDSS WDRDSTIDAD LFSDSSGQHQ VIEGWQKGLV GQTVGSQVLL VIPPDQAYGD
KEQGPIPANS TLVFVIDILA AY
|
|---|
| |