Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1111 |
Symbol | potD |
ID | 6364070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1300554 |
End bp | 1301720 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642680285 |
Product | spermidine/putrescine-binding periplasmic protein |
Protein accession | YP_001955055 |
Protein GI | 189439974 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAACC TGCGTAAGAT CGCGGCCGGC TCCCTCGCCG CCGTGCTCGC GTTCTCGATG GCCGCCTGCG GCTCGAGCAA CGCCTCCTCC GATGGCACCG GCGAAAGCAC CGGCAAGGCC GTCACCGTGA ACGAAAAGTC CGCCAAAGCC ACCTCCCTCG CCGACTTCGG CACCATGGAA GACCTCGAGA AGGCCGCCAA GGAAGAGGGC GCGCTGAACG TCATCGCCCT TCCGCACGAC TGGTCCAACT ACGGCGAGGT CATCGAGAGC TTCAAGAAGA AGTACCCGGA GATCAAGGTC ACCGAGCTCA ACCCGAACGC CTCATCCAAG GAAGAGCTCG ACGCCGCCAA GACCAACAAG GGCACCGACG CCGCCCCCGA CGTCTTCGAT GTCGGCCAGG CCATCGCCGC CACCTCCACC GACTACTTCG CCCCGTACAA GGTGCAGGCC TGGGACAAGA TCCCGGACAC CGCCAAGGAC GCCGACGGCG CCTACTACGC CGACTACACC GGCATCATGT CCGTGGGCTG GAACGCCGAC AAGTACGGCG ACATCAGCTC CCTGGACGAC CTGCTCGACC CGAAGTTCGC CGGCACCGTG GCCCTCAACG GCAAGCCCGC CGAGGCTGGC GCCGCCTTCA ACGGCTACCT GATGGCCAAC CAGCTCGCCG GTGGCGACAT CAACAACCTG CAGCCCGGCC TTGACTACTT CAAGAAGCTC AAGGAAGCCG GCAACCTGAC CACCGTCGAC GTGACCAACG GCACCATCGA CTCCGGCCAG ACCGGCGTGG TCTTCGACTG GACCTACAAC CAGGCCTCCT ACAAGAAGGA GCTCAAGGAC AAGGGCGTGA ACTGGAAGTA CAAGACCTTC CCGAAGGCCC AGGTCGTCAG CTACTACAAC CAGGCCATCA ACAAGGACGC GCCGCACCCG GCCGCCGCCC GCCTGTGGGA GGAGTACCTG TACACCGCCG ACGCCCAGAA CCTGTGGTTC AAGGGCGGCG CCAACCCGGT GCTGCTCGAT TCCATGAAGG AAGACGGCAC CGTCGACCAG GCCACTCTGA AGGACGCCAT CACCATCGAA GGCGAGCCGG TCTCCTACAC CAACGACGAC TCCACCCGCA TCACCGAGTG GCTCCAGAAC AACTGGGACA AGACGATCGG CAACTGA
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Protein sequence | MNNLRKIAAG SLAAVLAFSM AACGSSNASS DGTGESTGKA VTVNEKSAKA TSLADFGTME DLEKAAKEEG ALNVIALPHD WSNYGEVIES FKKKYPEIKV TELNPNASSK EELDAAKTNK GTDAAPDVFD VGQAIAATST DYFAPYKVQA WDKIPDTAKD ADGAYYADYT GIMSVGWNAD KYGDISSLDD LLDPKFAGTV ALNGKPAEAG AAFNGYLMAN QLAGGDINNL QPGLDYFKKL KEAGNLTTVD VTNGTIDSGQ TGVVFDWTYN QASYKKELKD KGVNWKYKTF PKAQVVSYYN QAINKDAPHP AAARLWEEYL YTADAQNLWF KGGANPVLLD SMKEDGTVDQ ATLKDAITIE GEPVSYTNDD STRITEWLQN NWDKTIGN
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