| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1106 |
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| Symbol | mscS |
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| ID | 6364065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1295285 |
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| End bp | 1296082 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642680280 |
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| Product | small-conductance mechanosensitive channel |
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| Protein accession | YP_001955050 |
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| Protein GI | 189439969 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAAT ATGCAGAAGA CATCGCACGC TGGTTTCAGG TGAACGCCGG CAAACTCATC
TGGCTGACCA TTGTATTGGC CATCGTATTT GTGGCCGACC GCGTCATCAG TCGCGTGTTG
CGCAAGATTC TGGACAATTC TCAGATTCCC AGCGCCTCGA TTTTCGTGAA CCTCACGCGC
GTGACCATCT GGGTCACCGG CGCAGCGATG GTACTGCAGC CCGTATTCGG CATCAATCCG
ACCACACTTA TCACCGCCCT TGGTGTTGGA GGTGTGGCGA TCTCGCTGGG TCTGAAGGAT
ACAATCGCCA ACATCATCGG CGGCTTCGGC CTGATGCTGG GCCGCGTAAT CCAACCCGGC
GATCTGGTGA CCATTCAAGG CGTCACAGGC ACCGTGCACG ACATCACCTG GCGTCAGACC
GTGGTGCGCA CCCGTTCCGG AGACATGATG GTCATCCCCA ATTCGGTACT CAATACCGCC
GCCCTGACCA AGCTCACGCC GGTCAGCGAA GGCATGGCCA CGCTTGAGTT CACGGCCAAG
ACCTCCGGCG ACCCGTCTGC GATCAGTCAG GATATTCTCG ACCGCGTAAC CAAAGCCACC
GCCGACGTGG CGCTGGAGGG TCAGCCGCCA TTGGTCAAGT TCACCGGCTT CTCCCCTTAC
GGCATGACCG GCCAAGTGCT TGTGTTCGCG CGCGAGGGTG TGCTGCCTTC CACCATCAAA
GATATGGCGG CGCGAGCCAT CGCCGGTTCG GGCACCGAAT ACCTTGTTGA AGATGGCGGC
TCGTCAGGCA ATCTGTGA
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| Protein sequence | MTEYAEDIAR WFQVNAGKLI WLTIVLAIVF VADRVISRVL RKILDNSQIP SASIFVNLTR
VTIWVTGAAM VLQPVFGINP TTLITALGVG GVAISLGLKD TIANIIGGFG LMLGRVIQPG
DLVTIQGVTG TVHDITWRQT VVRTRSGDMM VIPNSVLNTA ALTKLTPVSE GMATLEFTAK
TSGDPSAISQ DILDRVTKAT ADVALEGQPP LVKFTGFSPY GMTGQVLVFA REGVLPSTIK
DMAARAIAGS GTEYLVEDGG SSGNL
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