| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1082 |
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| Symbol | ispD |
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| ID | 6364604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1270968 |
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| End bp | 1271843 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642680253 |
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| Product | 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| Protein accession | YP_001955026 |
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| Protein GI | 189439945 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGA GAGATTTCGA TACCCCCGTC GAGACGCCTA CCGTCCAACC GGCCCCCGCT
CAGGGTGCCA AACCGGCGCA AACCGTGCCG GTGGTGGCCG TGGTGCTGGC CGCCGGCTTC
GGTACGCGCT TCGACCCCGA TAATCCCAAG CAGCTTGTCT CCGTGGGCGG CAAGCCCATC
GTGTGCTGGA GCATTGATGC CTTTGAACAT TGCGATCGCG TCAGCGACAT CGTGGTGGTG
GTCAATCCCA AGGTGCGCGG TGAAGTGGAA ACGTTGGTTG GCGAGATGGG CTACACCAAA
GTCCGCGTCA TCATTGACGG TGGTGACGAA CGTGTGGACA GTACCGCCGC CGCGCTCGAC
ATGCTGGCTA CGGCTGGCAT TCCGGACGAT GCCAAGATTC TGATCCATGA CGCCGTCCGT
CCGTTCGTGG AACAGTCCGC CATCGACGGT TCGATTGATG CGCTCGACCA GTTCACGGCC
GCGACCGTGG CCTACGCCTC AACCGACACC GTGCTGTTGA CCGAGGATCT GGGCGATTTG
AAAGTGGTCA AGTCGGTGCC GGACCGCCCG AACACCTTCC GCGCGCAGAC CCCGCAATCC
TTCCGCTTCG CGACGATTCG TCACGCTTAC GATTTGGCTG CCGCCGACCC GGACTTCCAT
CCCACCGACG ACACGCGCGT AGTGGTCGAT TATCTGCCTG ATGAACCCGT CGCCATTGTC
TCCGGTGCGG AAACCAACCT GAAGATCACC ACGCTGGAAG ATATTCCCAC AGCTGAGCGT
ATCGCCGAGG AGATTCTCGG TCGTGATCCC AAGGAAGAGG CCCGCGCCCG CATGCACGCC
CTGCTGGCCC AAGCGGCCGG CCAGATGCAT CGCTAG
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| Protein sequence | MTERDFDTPV ETPTVQPAPA QGAKPAQTVP VVAVVLAAGF GTRFDPDNPK QLVSVGGKPI
VCWSIDAFEH CDRVSDIVVV VNPKVRGEVE TLVGEMGYTK VRVIIDGGDE RVDSTAAALD
MLATAGIPDD AKILIHDAVR PFVEQSAIDG SIDALDQFTA ATVAYASTDT VLLTEDLGDL
KVVKSVPDRP NTFRAQTPQS FRFATIRHAY DLAAADPDFH PTDDTRVVVD YLPDEPVAIV
SGAETNLKIT TLEDIPTAER IAEEILGRDP KEEARARMHA LLAQAAGQMH R
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