Gene BLD_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1078 
SymbolaroG2 
ID6363978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1265637 
End bp1266770 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID642680249 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001955022 
Protein GI189439941 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAC TACGTGGTCC GGATAGTTCC GAGGACGAAC GTCGTTTGGG GGAGCAGGCC 
GTCTTTCCTG AGACCGTCGA TGTCAACATT CGTCAGCTTG ACCCCATTCC CGCGCCGCGC
GCCTTCCTCA GGGAGCAGCC GCTCACCGAT GAGATGAGCG AGCTCGTGCT CCACTCGCGG
CAGGAAATCC GCGATGTGCT CAACGGCCGC GACGACCGAC TGCTCGTCAT CGTGGGCCCC
TGCTCAATCC ACGACCCGAA GGCCGCGCAC GAGTACGCAG AAAAGCTGGC TGCCGTCAAG
CGCGAGTTGG AAGACCGACT CGTGATCGTG ATGCGCGTGT ACTTCGAGAA GCCGCGCACC
ACCATCGGCT GGAAAGGCCT CATCAACGAC CCCGATCTGG ACGGTCGCTT CAATATTCGT
AAGGGCATGT GGCTGGCCCG CAAGGTGCTC ACCGACGTGC TGAGCCTCGG CCTGCCCGCC
GCCACCGAAT GGCTTGACCC CATCACCCCG CAGTACATCT GCGACGCGAT CAGCTGGGGC
GCCATCGGCG CGCGTAACAC CGAATCCCAG GTCCACCGCG AACTGGCCAG TGGCCTGTCC
ATGCCGGTGG GCTTCAAGAA CTCCACCGAC GGTTCCATCA AGGCCGCCGC CGATTCCTGC
TTCGCGGCCG GCTTCGAGCA TCACTTCCTG TCCATTAACT TGGACGGTCG CGTGATTTCC
GCCGAAACCA AAGGCAACCC GGATTGCCAT CTGGTTCTGC GCGGCTCCAG CCACGGCCCG
AACTACGATG CCGAATCCGT GCGTCAAGCT CTGGAAGACC TCAAGGTTTC CAAAGCGTCC
GGCCCGAGCC AGCATGGCCT CGTCATCGAT GCCGCCCACG GCAACTGCGG CAAAGACGAA
AACCGCGAAG CCGAAGTCAT CGAAGAGATC GCTGAGCGCC TGGCGCACGG CGAACAAGGC
ATCACCGGCG TAATGATGGA AAGCTTCTTG GTCGGCGGTC ACCAAAAGCC GGCCCCGCTC
GACCAGTTGG TCTACGGTCA GTCCGTCACC GACTCTTGCG TGCCGTGGGA ACGCACCAAC
GAACTGCTGC ACACCCTAGC CGACGCCGTC ACCGCTCGCC GCTCGGCTAA ATAG
 
Protein sequence
MAALRGPDSS EDERRLGEQA VFPETVDVNI RQLDPIPAPR AFLREQPLTD EMSELVLHSR 
QEIRDVLNGR DDRLLVIVGP CSIHDPKAAH EYAEKLAAVK RELEDRLVIV MRVYFEKPRT
TIGWKGLIND PDLDGRFNIR KGMWLARKVL TDVLSLGLPA ATEWLDPITP QYICDAISWG
AIGARNTESQ VHRELASGLS MPVGFKNSTD GSIKAAADSC FAAGFEHHFL SINLDGRVIS
AETKGNPDCH LVLRGSSHGP NYDAESVRQA LEDLKVSKAS GPSQHGLVID AAHGNCGKDE
NREAEVIEEI AERLAHGEQG ITGVMMESFL VGGHQKPAPL DQLVYGQSVT DSCVPWERTN
ELLHTLADAV TARRSAK