Gene BLD_1052 details

Gene Information

• Locus tag: BLD_1052
• Symbol: rpsP
• ID: 6363008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 1238510
• End bp: 1238971
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642680223
• Product: 30S ribosomal protein S16
• Protein accession: YP_001954996
• Protein GI: 189439915
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0228] Ribosomal protein S16
• TIGRFAM ID: [TIGR00002] ribosomal protein S16

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAACCA AGATTCGTCT GAAGCGACAG GGCAAGAAGT TCTACGCCTT CTACCGTGTG 
GTGGTCGTCG ATTCCCGCAA GAAGCGTGAC GGCAAGGTCA TCGAGGAGAT CGGTACCTAC 
AACCCCAACA CCCAGCCCTC GACCATCCAG ATCAAGTCTG ACCGCGCTCA GTACTGGCTC 
GGCGTCGGCG CTCAGCCGTC CGAGCCCGTC TTCAAGCTGC TGAACATCAC CGGCGACTGG 
CAGAAGTACA AGGGCCTTGA AGGTGCCGAA GGCACCCTGA AGACCGTTGA GGCTGGCCCG 
GACGCCGAGG CCCGCATCGC GGCCGTTGAG AACCAGGCTC AGAAACTGAA GGCCGCCAAG 
GCCGAAGCTG CCGCCAAGGC CAAGGCTGAA GCCGAAGCCG CTGCCGCCGC TGAGGAAGCC 
CCGGCTGAAG AGGCCGCCGA AGAAGCCCCG GCTGAGGACT GA 

 

Protein sequence

MATKIRLKRQ GKKFYAFYRV VVVDSRKKRD GKVIEEIGTY NPNTQPSTIQ IKSDRAQYWL 
GVGAQPSEPV FKLLNITGDW QKYKGLEGAE GTLKTVEAGP DAEARIAAVE NQAQKLKAAK 
AEAAAKAKAE AEAAAAAEEA PAEEAAEEAP AED