| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1031 |
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| Symbol | rph |
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| ID | 6362615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1216871 |
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| End bp | 1217647 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642680202 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001954975 |
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| Protein GI | 189439894 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGGGGC GCATGGTTGA AATCAAAGAC ATGCTTGGCG ATCACCAAAT AATTCGTGCC
GACGGCCGCA AGGTCGACGA ACTGCGCCCT GTGCGCATCA CCCGCCACTT CACCGACGCC
CCCGAAGGCT CCGTGCTCAT CGAATGCGGT AACACGCGCG TGATGTGCAC CGCCACTTTT
ACTCCCGGTG TGCCGCGTTG GCGCAAGGAC TCCGGCCTCG GCTGGGTCAC CGCCGAATAC
TCGATGCTGC CGCGTGCCAC CGCCGAACGC ACCGACCGTG AATCCGTACG TGGCAAAATC
GGTGGCCGTA CCCACGAAAT CAGCCGACTG ATTGGCCGCT GCCTGCGTGG CGTCATCGAT
ATGAAGGCGC TCGGCGAGAA TCAGATTCAG CTTGACTGCG ATGTGCTTCA GGCCGATGGT
GGTACTCGCA CGGCTTCCGT AACCGGTGCG TACGTGGCTT TGGTCGACGC AGTCAATTGG
GCGGAGAAGC ACCGCCATAT CAAGTCCGCC AGCCGCGTGC TTAAGGACTA TGTGTCCGCC
GTATCGGTGG GCGTGATCAA CGGCACTCCT ATGCTTGACC TGCCATACAT TGAAGACAGT
CAGGCCATGA CCGACATGAA CGTGGCCATG ACCGGTTCCG GCACCTTCAT CGAGATTCAG
GGCACCGCGG AACACCGTCC GTTCAACCGT GCCGAACTCG GCACCCTGCT TGACTTGGCC
GAAAAGGGCA ACAAGGAACT GCAAGCCGCC CAGCGTGCCG CTCTGTCCCT AGACTAA
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| Protein sequence | MLGRMVEIKD MLGDHQIIRA DGRKVDELRP VRITRHFTDA PEGSVLIECG NTRVMCTATF
TPGVPRWRKD SGLGWVTAEY SMLPRATAER TDRESVRGKI GGRTHEISRL IGRCLRGVID
MKALGENQIQ LDCDVLQADG GTRTASVTGA YVALVDAVNW AEKHRHIKSA SRVLKDYVSA
VSVGVINGTP MLDLPYIEDS QAMTDMNVAM TGSGTFIEIQ GTAEHRPFNR AELGTLLDLA
EKGNKELQAA QRAALSLD
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