| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1019 |
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| Symbol | araD |
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| ID | 6362658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1201226 |
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| End bp | 1201918 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642680187 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_001954963 |
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| Protein GI | 189439882 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTT TGGCTGATTA CGGCCCCGAG GTTCGCGCCG AGGTCAAGCA GGTTCGTGAG
GTCGTCTCCA ACCTGCACCA GCAGCTGATC AAGTGGAACC TGGTCGTGTG GACCGCGGGC
AACGTTTCCC AGCGTCTGCA CACCGCCGAC CTGTTCGTCA TCAAGCCCTC CGGCCTGCGC
TACGAGTACC TGACCCCGTC CTCCATGGTC GTGTGCGACC TTGACGGCAA CGTGGTCGAC
GGCACCGAAG CCCCGTCCTC GGACACTGCT TCCCACGCCT ACATCTACCG CAACATGCCC
GACGTCTACG GTGTCGTGCA CACCCACTCC ACCTACGCCA CCGCTTGGGC TGCCACTGGT
CAGAACATCC CGTGCGGCCT GACGATGATG GGTGACGAGT TCGGCGGCCC GGTGCCGGTC
GGCCCGTTCC GTCTGATCGG CTCCGAGGCG ATCGGCAAGG GTGTCGTCGA GACCCTCAAG
AAGTACCCGA AGTCCCCGGC CGTCCTCATG CAGAACCATG GCCCCTTCAC CATCGGCAAG
GATGCTGAAG GCGCCGTCAA GGCCGCTGCC ATGACCGAGG AAGTCGCTCA CACCATGTGG
GCCGCCCGTC AGCTCGGTGA CATCATCGAG ATCGACCAGG CCGACATCGA TAAGCTCAAC
GACCGCTACC AGAACGTCTA CGGTCAGCAC TGA
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| Protein sequence | MATLADYGPE VRAEVKQVRE VVSNLHQQLI KWNLVVWTAG NVSQRLHTAD LFVIKPSGLR
YEYLTPSSMV VCDLDGNVVD GTEAPSSDTA SHAYIYRNMP DVYGVVHTHS TYATAWAATG
QNIPCGLTMM GDEFGGPVPV GPFRLIGSEA IGKGVVETLK KYPKSPAVLM QNHGPFTIGK
DAEGAVKAAA MTEEVAHTMW AARQLGDIIE IDQADIDKLN DRYQNVYGQH
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