Gene BLD_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1006 
Symbol 
ID6363536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1181442 
End bp1182449 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content59% 
IMG OID642680174 
ProductMalG-type ABC sugar transport system permease component 
Protein accessionYP_001954950 
Protein GI189439869 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.541487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTG CAACCATGAC TTCAACAACA ACCATGACCC TGGCCGATCT CAAGGCTCAG 
GAAAAGGCCG CCAAGAAGGC CGAGAAGGAG CGTCAGAAGC GCATCGACGC CGACGAGAAG
GCCGAGCGCA AGCGCGCCGC CAAAACCGGT TTCTCCAACC CGGCGAACCC GACCCGCTCG
ATGGCCCTGA CCATCGTGTG CGCGATTTTC GCGGTCTACT GCCTCTTCCC GTTTGTCTAC
CTGATGATTA ACGCCACCAA GACCCAGTCC GACTTCACTT CGACGTTCGG CCTCGGTTTC
GGCAAAACGT TCGCCCTGTT CGACAACATC GCCACGGTGT TCACCTATCA GGACGGTATC
TTCGGCCGCT GGTTCGTCAA CACGATTCTG TATGTGGTGG TCGGCGCCGG CGGTGCCACC
TTGCTGGCCA TCATGGGCGG CTATGCGCTG GCCAAGTTCC GCTTCCCCGG CCGTAAGCTG
TGCTTCGTGA TCATCATCGG CGCCATTTCG GTGCCGGGTA TCGCGCTGGC CGTGCCGCAG
TTCCTGCTGT TCGCCAAGAT GGGCCTCACG AACACCCCGT GGTCGATGAT TATCCCGAGT
TTGGTATCCA CGTTCGGTCT GTATCTGATG TGGATCTTCT CCGATCAGGC CGTGCCGGAT
GAGCTGCTTG AAGCCGCGCG CGTGGATGGT GCCGGCGAGT TCCGCACCTT CTTCCAGATT
TCCCTGCCGC TGTTGGCACC CGGCATCGTG ACCACTGCAT TGTTCGCCAT TGTAGCGACG
TGGAACAACT ACTTCCTGCC GTTGATCATG TTGAAGGATT CCAACTGGTA CCCGTTGACG
ATCGGTCTGA ACCAGTGGAA GGACCAGGCT TCAACCGCAG GCGGTCAAGC TATCCAAAAC
CTCGTGATTA CCGGTTCGCT GATCACGATC ATCCCTCTGG TGATTGCGTT CCTGTGCCTG
CAGAAGTACT GGCAGTCAGG CCTCGCCGCA GGCGCCGTCA AGGAGTAA
 
Protein sequence
MSTATMTSTT TMTLADLKAQ EKAAKKAEKE RQKRIDADEK AERKRAAKTG FSNPANPTRS 
MALTIVCAIF AVYCLFPFVY LMINATKTQS DFTSTFGLGF GKTFALFDNI ATVFTYQDGI
FGRWFVNTIL YVVVGAGGAT LLAIMGGYAL AKFRFPGRKL CFVIIIGAIS VPGIALAVPQ
FLLFAKMGLT NTPWSMIIPS LVSTFGLYLM WIFSDQAVPD ELLEAARVDG AGEFRTFFQI
SLPLLAPGIV TTALFAIVAT WNNYFLPLIM LKDSNWYPLT IGLNQWKDQA STAGGQAIQN
LVITGSLITI IPLVIAFLCL QKYWQSGLAA GAVKE