| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1003 |
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| Symbol | |
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| ID | 6363667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1175135 |
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| End bp | 1177828 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642680171 |
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| Product | arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_001954947 |
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| Protein GI | 189439866 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.629221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGAA ATACCGCGCT TACTCGCATT ATGGCATCCG GCGTGGCCGC CATAATGCTC
TGCGCAGGAG GCACGTTCAC TGTAAACGCC GCCGAAGAAG AACCAGTTAA AGCCGACGTC
TCGGTCAAGG CCATCCAAGG CTTAAGCGAT GATTTCATCG GCGGTATGGA CGTCTCATCC
ATGCTCTCGC TGGAAGAAAG CGGCGTCACG TTCAAGAACG CCAATGGCGA GGTCGAGGAT
TTGTTCACGT TGCTCAAGGA ATCCGGCGTG AACTATGTGC GTCTGCGTGT GTGGAACGAT
CCGTTCACCG CAGACGGCCA AGGATATGGC GGCGGCAACG TCAACGCCGA TCGCGCACTG
ACCATGGCCA AGCGAGCCAC GGCAGCAGGG CTGAAAGTGC TGGTCGACTT CCATTACTCC
GATTTCTGGG CCGACCCCAG CAAGCAGCAG GTGCCCAAGG CGTGGAAATC CTTTGAAGGC
GACGCGGACA AAACCGCCGA CACCGTATAC GACTACACCA AGCAGACTCT GACCACGTTC
AAACAAGCCG GCGTGGACGT CGGCATGGTG CAGGTCGGCA ACGAAACCAC TGCGAAAATC
GCCGGCATCT CCGGCTGGGA CGGCATGTCC AAAGTATTCT CCGCAGGTTC CAAAGCCATA
CGCGAAGTGC TCCCCGAAGC CAAGGTCGTC ATTCATTTCA CCAACCCGGA GAAAGCCGGC
ACCTACGCCA CTTACGCCAA ACAGTTGAGC AACCACAATG TGGATTACGA TGTGTTCGCC
AGCTCCTACT ACCCGTTCTG GCATGGCACC ACCGAAAACC TCACCAGCGT GCTCAAGAAC
GTGGCCTCCA CTTATAAGAA AGATGTGATG GTGGCGGAAA CGTCGTGGGC ATACACCTTG
GATGATGGCG ACGACGATTC CAACACAGTG CCCAGTAAAG TAACCGCCGA TAACCTCAAG
AAATACGACA TCAGCCCGCA AGGCCAGGCC GATGAGATTC GCGCGGTCGC CGAGGCCGTG
AACAATATCG GCGACAATGA TGGCGATGGC GAAAACGACG GCCTGGGTGT GTTCTACTGG
GAGCCCGCAT GGGTGCCCGT GGGCACCGGC GGCAAGGATA ACGCCGAACT GGTGGATACG
TGGAACAAGT ACGGTGGCGG CTGGGCCACT GAAGCGGCCG GCGAATACGA TCCCAATGAC
GCCGGCCTGT ACTGGGGCGG CTCAGGTGTC GATAACCAAG CTTTGTTCGA TTTCGATGGC
AAGGCGCTCG CCTCTCTGCC GACGTTCAAG TACATTCACA CCGGTGCCGT CACCGATCAT
GTGTTCACCA AGATAGATCC AGTGGAGATT ACCGCGACTG ACTCGGATTC CATCGACGCG
ATCAAAGCGC AATTGCCGAG TGAGGTGGCC GCACACTATC AGGATGGGGT GGACGAGACC
GAAACCGTGA CCTGGCAATC CGCTGCGCTT GACTGGATTC GTGGCGCAGG CACATACACC
ATCACCGGCA CCACCAACGC TGGCCACGAC GTGACCGTCG CCGTCACCGT CACCGCCACT
CCCGCCAAGG ATTACGTAAC GGACGGCAGC TTCGAGAACG CTGAGAACGA TAAGAACTGG
ACCATTGCCG GCACCGGTGC GTCCATCACC GAAGACAGTG GCAACGCCGC CGACGGCAAG
CGCGCGCTGA AGTTTTGGGC ATCCGATGCC TACAGTTTCT CCGCCACGCA GACCATCACC
GGACTCGAGC CTGGCGAATA CGTGCTGACC GCCATGAGCC AAGGCGCGGC AGCGGACAAC
GCCGCTATTA CCGATGGTGT GGCCCTCTCC GCCACAACGG GTGGCAAGAC CACGTCCGAT
GCGCTGGAAC TCAACGGTTG GGTTAAGTTC GATACCGCCA CCGTGCCTGT CACCGTGGGT
GCTGATGGCA CGGCGACCAT CACCATCACG GGCAACCTGC CTGCCGACGC ATGGGGCAAT
GTGGACAAGG TCTCACTCGT CAAAAAGACC GAAACTCCGG TGAAGCCATC CACGGAGAAC
CTGGACAAGG CCGTGGCCGA AGCCGGGAAA ATCAATCGCG ATGAGTACAC CAACGAGTCG
CTCGCCAAAC TCGATCAGGC GCTTGCCGCC GCTGACGTGC TGCTTGCCGG CAGCACCTAC
ACCGAGCAGG ACGTGAACGA TGTGATCAAG CTTGTTGCCG ATGCCATTGC CGGCCTCGCC
CAAAAGGAGG TCTCCAGCCT GACCGTCACG CCAAGCAAAA CCACCTATCA GGTGGGCGAT
GCCATCGATG CCGACCATGA TCTCAAGGTC GTGGGCAACT ATTCCGCAGG CATGGGCAAC
GTGACGCTTT CCGCCGACCA GTTCACGCTC GATTACGATT TCTCCGCTCC CGCTGATGCG
GCGAAGGTTA CCGTAACGCT CAAGTCGAAT CCGAATGTCA CCGAAACCTA TACGGTTGCG
GTTACCGCTC GGGCCGAAGG TGGTTCCGGC AACGGCTCGG ACGGTGCGGG TAATGGCGGG
GCTACTATCA ATCCCGATAC GGGCGAGGGC GATAAGACCA ACGGTGCGAA TGGCGACAAG
ATCACTGGTG TGCTGAGCAA TACCGGTAGC GCGGTGACTG CCGTGGGTCT TGCGGTTGTC
GTTCTCGGCG TGGCCGGCGG GGTCTCGCTT GCTTTGCGTC GTAAGCGCTC CTGA
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| Protein sequence | MRRNTALTRI MASGVAAIML CAGGTFTVNA AEEEPVKADV SVKAIQGLSD DFIGGMDVSS
MLSLEESGVT FKNANGEVED LFTLLKESGV NYVRLRVWND PFTADGQGYG GGNVNADRAL
TMAKRATAAG LKVLVDFHYS DFWADPSKQQ VPKAWKSFEG DADKTADTVY DYTKQTLTTF
KQAGVDVGMV QVGNETTAKI AGISGWDGMS KVFSAGSKAI REVLPEAKVV IHFTNPEKAG
TYATYAKQLS NHNVDYDVFA SSYYPFWHGT TENLTSVLKN VASTYKKDVM VAETSWAYTL
DDGDDDSNTV PSKVTADNLK KYDISPQGQA DEIRAVAEAV NNIGDNDGDG ENDGLGVFYW
EPAWVPVGTG GKDNAELVDT WNKYGGGWAT EAAGEYDPND AGLYWGGSGV DNQALFDFDG
KALASLPTFK YIHTGAVTDH VFTKIDPVEI TATDSDSIDA IKAQLPSEVA AHYQDGVDET
ETVTWQSAAL DWIRGAGTYT ITGTTNAGHD VTVAVTVTAT PAKDYVTDGS FENAENDKNW
TIAGTGASIT EDSGNAADGK RALKFWASDA YSFSATQTIT GLEPGEYVLT AMSQGAAADN
AAITDGVALS ATTGGKTTSD ALELNGWVKF DTATVPVTVG ADGTATITIT GNLPADAWGN
VDKVSLVKKT ETPVKPSTEN LDKAVAEAGK INRDEYTNES LAKLDQALAA ADVLLAGSTY
TEQDVNDVIK LVADAIAGLA QKEVSSLTVT PSKTTYQVGD AIDADHDLKV VGNYSAGMGN
VTLSADQFTL DYDFSAPADA AKVTVTLKSN PNVTETYTVA VTARAEGGSG NGSDGAGNGG
ATINPDTGEG DKTNGANGDK ITGVLSNTGS AVTAVGLAVV VLGVAGGVSL ALRRKRS
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