Gene BLD_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0972 
Symbol 
ID6363201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1137240 
End bp1137797 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID642680140 
Productputative permease 
Protein accessionYP_001954916 
Protein GI189439835 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCGCTA TCCAGACAAC TTCCGATAAC ATCATGCCCG CCGGCGAATC CGGCACCGCT 
TATTCCCATA GCCCCCACAA CGCTTCCGAA ACCAGGCATT TCGACCATCC GCATAAGGTG
ATGCTCGGCC TGTACATCGG CGCATTTCTC GGCATGCTGT CCGAGACATC CATGAACATC
GCCCTGCCTG ATCTGATGGA CGAGTTCTCC GTATCCTCCG GTACCGCACA ATGGATGGTC
GTCGGCTATA TGCTGGCCAT TGGCGTGGTG CTGCCGTGCG TGGGTTTCAT GCTCAAATGG
ATCAAAGCCA AAACGCTCGT GCTGTTCGCG CTGACCTGCT TCCTCGTCGG TGCCTTGGTA
TGCACCGTGG CCACCGGTTT CCCCGTGCTG CTCGCCGGCC GAATCGTGCA GGGCATCAGC
ACCGGCATCG TGCTGCCCCC ATGTACGCAT CGATCATGCG CGTATTTCCA CCGTATAGGA
TCGGTGCCGC CAATGGCGTG GCCGGCCTGG TGGTCATGTT CGCGCCGGTC ATCGGCCCCA
CCCTGGCCGG CGCGCTGA
 
Protein sequence
MSAIQTTSDN IMPAGESGTA YSHSPHNASE TRHFDHPHKV MLGLYIGAFL GMLSETSMNI 
ALPDLMDEFS VSSGTAQWMV VGYMLAIGVV LPCVGFMLKW IKAKTLVLFA LTCFLVGALV
CTVATGFPVL LAGRIVQGIS TGIVLPPCTH RSCAYFHRIG SVPPMAWPAW WSCSRRSSAP
PWPAR