| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0955 |
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| Symbol | uvrD4 |
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| ID | 6363798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1104145 |
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| End bp | 1108431 |
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| Gene Length | 4287 bp |
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| Protein Length | 1428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642680123 |
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| Product | superfamily I DNA and RNA helicase |
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| Protein accession | YP_001954899 |
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| Protein GI | 189439818 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGACG GCATCGACCG TGATGGAGCG GCGAGGCTGA TTGTCGGCAC GCCTGGAAGC
GGCAAAACTG AATTCGCCTT ATCGGTGTTG ATGGCGGGGC TGCGCCGCTA CGGTGGCACG
CAGGCGGTGA TGGCCGTATC CGGCCGTGTG GCCGCCGACG CATTGGGCAA TCGGGTGATT
CGTGAGCTCG GGTTTTCCGT GCAGGCCAGG CCGGTCACCA CGCTGGGTGC CGTGGCATTC
CGGGCCATAT CGGCTTCGCG CGAGGGAACT GGATTGCCGT CGCCTCGATT GCTGAACGGT
GCGGAACAGG ATGCTTTGCT GCGTCAAGTC ATGGCCGTGC ATCTGCGCCA TGCCGTAGCG
GGAGATGATT GCGGCACCTG TGATTTGCTG CGCGTCTACT TTGCCCAGGA TGACTGGGCG
AGACTCATAC GCGATGCCGG TGCCGGCGAG ATGCCCGGCT CGGCCGCTTC CGCACAATCA
AGCCTCTCGC AACAAGGGTC GGATTCGCCG TCTCCGACGT CGGCAGGCGG CTCGACCAGC
GCGGATAGGT TCACGCGAGG TATTTCAGAT GCGTTTATCA GCCAGTTGCG CGATATGCTG
GCCCGATTGG ATGAGCTCGG TGTAGGCGTT CACGAAGAGC CACGTCTCTT GGACGCCGTG
ACGGAGGACG CGCGATTGTC GGTGCAATGG CGTTTGGCTT TCGCGTTGCG CCGTGAATAT
ATTGCAGCCC AAAGCGCGGT ATATCCGGGG CAATACCGTT TGGATGCCTC GTATTTGCTG
GTGGCAGGCG CTCGTGTGGT GCGTGAGGCA TTCGCCGCCG ATCACGCGGA TGATTCCGAC
CGGCCTATGT GTGTGGAGGC GTTGGGCTTG CCCCGGCTGC TGGTTGTGGA TGATGTTCAA
GACACCACGC TGGCCGGCAT GCGCTTCTTG GAGGAGTTGG GGAATGCCGG CGTCAAGTTG
GTGCTGGTCG GCAACCCGGA TGAATCGGTG CAGACCTTCC GCGGATCGTA TCCGGAATAT
CTGATGCGCC GTGCCGTGGA AGGGCGGCTG AAGGCCAAGG AAGAACAGCT GGTTGGCGGC
AGTGCCGTCG CTGATCAGTC GCACATGACG ATGGCTGATG TGATCGCGTC TCGTATTTCG
CTGTCGATTC CCTCGCCGGA AGACGAGCCG CTGCCTCCGG CCGAGCGTCC CGGCAAGCTG
ACCGCCATAC TGGGCGGAGT CGATGCAGCG AATTATCAGG CGGACGGCAC GGTGACCGCC
GGCCTGTACC GATCCTCACG TGAGGAGCTG GATGATGTGG TCTGGCGCAT CAAGCGGGCG
CATCTTGACC GGCATATTCG GTGGAACGAC ATGGCGGTCA TCACCCACGA CAATGCCGCC
GTGCGGCTGT TCGGCGAACG ACTGCGCCGA GATGGTGTAC CGGTGCGGTA TTCGTCGGTC
ACCCGTCCTT TGAAGGACGA GACTTTCGTG CAGGGATTGT TCGCGCTTGT GGAGCTTGCC
CGATTGCGTG CCGAGGGGAT GGCGGAATGC CAGATGACGT TGGCTTCCTG CGCGGCATAT
ATAAGGACTA GAGTGGCCAC GTTGATGAAC GGCCCGTTGG TGAGTGCCGG GGCCAAACCC
GGTCAGGGGC GTCCCGCAAG GCTTGCGCCG ATCGAATCGG CCATGGGGTC GTTGGAGTCG
CTGGCGCATC TCGCCACGGA TGATGCCATG CTGACCTCTC TGACGACGGC ATGGGAAACA
TTGCGTGAAA CATACCATGA AACACGGCGT GAAACAGGTC GTGAAACATC CTCGTCAGTG
GTTTCGACGT CAGCGGTTTC GTCGTCAGTG ACTTCGTTGC CAGTGTCTGT CGAAATACTC
GGTGAACCGT CCGGCGATGA CTTGGCCTTT GGCGTTGACG CGCTGTACGT GATGCTTGCC
ATTGATGATG CCGCCGCGCC GGCGCAGGCT GCGCTCGCAT CCATCCACGC GGTGCTCGGC
AACGACCCTC AGGCCCGCGC TTTTGCGAAC CTGTGGCATC TGGTGGGCAG CGTTGCTTCC
GGCTTGGAGC GGCTGCCGGC AAGCCAGCGC GTACAGCCGC GCTATGCGCT GTCTGTTGCG
TGGAACGCCA CCGGTCTGGC ACCGGTCTGG CAGCGTGCGG CATTATTCAA CACGGCAGAG
GGGCGTACGG CCAATGACCG GCTGGACGCG GCAATGCGCC TGTTCCAGTT CGCCGATGAT
TCCACCGCCA GTCGAGACAT CACGTCATTC ATGGCACAGG TTCGGGGCAT GGAAGTGCAG
GCCGATTCCT TGGCCCACAT AGGACCGGTG GAAGACGCGG TGACATTGAC TACGCCGGCA
GGCGCGGCCG GACGCCACTG GGAATATGCG TGGATACCGG TGGTCCAGCA AGACGTGTGG
CCGAACCTCG CCGGGCGCAA CACCATGTTC GGTGGTGAAG ACCTTGCCGA GCTCGTGCTG
AGGGGAGCGC TTGAAGAAAG CGACAAAACC GGGCATGATC CGCGGTTCGC GGCTGTATTG
TCGGGCGAGA AGAAGAGTTT CCTGGTCGCG CTGACCCGTG CACGGCGAAT CATGATCAGC
GCGGTATGGA ACGACAGCAT GAGCCCCTCG GACTTTCTCT TCGGGTATCT GCCGGAATAC
TATCCGCGCA ACCGGCAACA GGCGCCTTTC ACCACAGTGG GGGCACATGC GGGATTCGCC
GAATATGATC TGGCCGGATT GGACGCCGAC CCACGTGGGT TGGTCAGCGC CGCCCGCGCG
GTTCTGGCCA CTGCTCAACC GCAGCAGGCT GCCGCAAAGG ACGCCGCGAT TGCGTTGACA
CTCCTGTTAG AGCATGGTGT GCGCGCCGCA AATCCGCAGA GCTGGGCGTT TGTGGAATCG
CCGGCCCAAT CGGATAGCGC GTCATCTGGC GGTGCGTCAT CTGGCGGTGC GTCATCTGGC
GATACCTCAT CTGACAGTGC CTCATCCGAC AGCGCGTCAT CTGGTGGTGT ACAGCCTGAC
GGTATCCAAA CAGGGAAAGG CAAGACGGAT GCGCAGGCCG CGCCCATGGT CACCTTATCT
CCATCGGCGG TCGACAGCCT ATGGGCGTGC CCGGTGTGCT GGATGCTGGA GAACCGGTTC
GCCGGTCCTC GCCCCAGCTC CGTGGCCACC AGTTTCGGAA CCCTCATCCA TGCGGTTGCG
CAGCAAGGCA GCGAGGAAGG GCTGGACCAT CTTTCCCACA ATGCCCAGGC GTTGGCCGCA
CTGGGCTTGG ACTCCACGGC CGGCACGGAA CGTCGCATCG AGGCTGTCTC GGCACGGCTT
AATGCCATCT ATCAGAGCAA ACGTCCTGAT CCGAATGCCA TAGCCGACAC CCGGAACCGC
TATGAGGCCA CCCGTAAGGA CGAGTCCGCG GCGGATACCC TGCGCAACAT CGCCGATTAC
TTTGTGCGCA GCGACGCCGA TCCGGAAACG TATCTTGGCA AGAACTCCAG CAACTTCAGC
ATTGGCGCAT TGGCCGGTGC CGAATGCGAA CGGGAGTTTG CCGCACGATT CGATGTGCGT
GACATACTCG ACGCATACAA TGCCGTGCCC GGCCTGCACC CAATCGGTCG GAACACGCTG
GTCCGTCTGA TGGGAGCACT GGTCGGAGGG TGGCCGGAAG GCATGGACGA GCATCTGACC
GTGAGACTGT CCGGGCGCAT CGACCGTATG GAAACCCGCG TACTCGCAGA CGGCGGCGAA
TGCATTCGCC TCATTGACTA CAAAACAGGC AGAACGCCCA CGGTCAAACA GATTTTCAAT
GATTTGCAGC TCGTGTGCTA TCAGCTTGGC CTCGTGTTCC CCGAAGACGG GCCGCGCGGT
GCCAAGGCAC TTGCCGCAAT GCCGCATATC AGCCAAAGCG TGCTATTCCA TGTCGGGCAG
AATGCGGCAC CAGCCAGAAG CTACGCTCCG GAAGGTGCCT TCCAGCCGCC GCTGTTCACT
GATGGCTCGT TGAATGCCGA ACCGTTCACG CCCCGATACT GGTATAAAGA CCCCAACCGT
TTCTTCGACA TACCCGCCAT AGATCCGGCT ACTCCTCCCG AAGGTGTGAG TGCCGAAGCG
TGGGCGCAAT TCGCCGCGCT CGCCGGTACG CAGACGTTAT GGTCGCTGAC CATGATCGCC
CGCGTATTCT ATGCCGCGGC GGCCAGCAGA TCAGCCATCA TCGAGGCCCA TCCGCAAGAC
ACCCATATCG GATTCTGCCG TATGAAGAAC GTCTGCCCTG CCTGTGCAGG CCAGATCGAC
ACGATTTTCG AAACGAGGCA AGCATGA
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| Protein sequence | MLDGIDRDGA ARLIVGTPGS GKTEFALSVL MAGLRRYGGT QAVMAVSGRV AADALGNRVI
RELGFSVQAR PVTTLGAVAF RAISASREGT GLPSPRLLNG AEQDALLRQV MAVHLRHAVA
GDDCGTCDLL RVYFAQDDWA RLIRDAGAGE MPGSAASAQS SLSQQGSDSP SPTSAGGSTS
ADRFTRGISD AFISQLRDML ARLDELGVGV HEEPRLLDAV TEDARLSVQW RLAFALRREY
IAAQSAVYPG QYRLDASYLL VAGARVVREA FAADHADDSD RPMCVEALGL PRLLVVDDVQ
DTTLAGMRFL EELGNAGVKL VLVGNPDESV QTFRGSYPEY LMRRAVEGRL KAKEEQLVGG
SAVADQSHMT MADVIASRIS LSIPSPEDEP LPPAERPGKL TAILGGVDAA NYQADGTVTA
GLYRSSREEL DDVVWRIKRA HLDRHIRWND MAVITHDNAA VRLFGERLRR DGVPVRYSSV
TRPLKDETFV QGLFALVELA RLRAEGMAEC QMTLASCAAY IRTRVATLMN GPLVSAGAKP
GQGRPARLAP IESAMGSLES LAHLATDDAM LTSLTTAWET LRETYHETRR ETGRETSSSV
VSTSAVSSSV TSLPVSVEIL GEPSGDDLAF GVDALYVMLA IDDAAAPAQA ALASIHAVLG
NDPQARAFAN LWHLVGSVAS GLERLPASQR VQPRYALSVA WNATGLAPVW QRAALFNTAE
GRTANDRLDA AMRLFQFADD STASRDITSF MAQVRGMEVQ ADSLAHIGPV EDAVTLTTPA
GAAGRHWEYA WIPVVQQDVW PNLAGRNTMF GGEDLAELVL RGALEESDKT GHDPRFAAVL
SGEKKSFLVA LTRARRIMIS AVWNDSMSPS DFLFGYLPEY YPRNRQQAPF TTVGAHAGFA
EYDLAGLDAD PRGLVSAARA VLATAQPQQA AAKDAAIALT LLLEHGVRAA NPQSWAFVES
PAQSDSASSG GASSGGASSG DTSSDSASSD SASSGGVQPD GIQTGKGKTD AQAAPMVTLS
PSAVDSLWAC PVCWMLENRF AGPRPSSVAT SFGTLIHAVA QQGSEEGLDH LSHNAQALAA
LGLDSTAGTE RRIEAVSARL NAIYQSKRPD PNAIADTRNR YEATRKDESA ADTLRNIADY
FVRSDADPET YLGKNSSNFS IGALAGAECE REFAARFDVR DILDAYNAVP GLHPIGRNTL
VRLMGALVGG WPEGMDEHLT VRLSGRIDRM ETRVLADGGE CIRLIDYKTG RTPTVKQIFN
DLQLVCYQLG LVFPEDGPRG AKALAAMPHI SQSVLFHVGQ NAAPARSYAP EGAFQPPLFT
DGSLNAEPFT PRYWYKDPNR FFDIPAIDPA TPPEGVSAEA WAQFAALAGT QTLWSLTMIA
RVFYAAAASR SAIIEAHPQD THIGFCRMKN VCPACAGQID TIFETRQA
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