| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0942 |
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| Symbol | prfB |
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| ID | 6364364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1084757 |
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| End bp | 1085881 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642680110 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_001954886 |
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| Protein GI | 189439805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0440008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAT TTGACTTTAC CCAGGCGATC GGCGAAGCCC GCGCCAAATA CGAATCCATC
GCCAAGGCGC TGGACGTCGA CCGACTCAAG GCCGATATCA AGGATCTCGA AACGCAGGCC
GCGGCCCCGG GCCTGTGGGA TGACCCGGAA AACGCCCAGA AGATCACCAG CCGGCTGTCC
GCCGCGGAGT CGCAGCTGAA GCGTCTGAAC TCCGCCTCCC AGCGCATCGA CGATGTGGAA
ACGCTCGTCG AACTCGGCCA CGAGGAGGGC GATCAGGACT CTCTGGACGA GGCGCAAAGC
GAAATCGGCG AGATCCAGAA GGATCTCGAC CAGATGGAGA TTCAGACCCT GCTTGACGGC
GAATATGACG AACGTTCCGC CGTGGTGACC ATCCGCTCCG GTGCCGGCGG CGTCGACGCG
GCCGACTTCG CGCAGATGCT GCTGCGCATG TACCTGCGCT ACTGCGAGCG TAACGGCTTC
AAGGCCAAGG TCATGGACAC CTCCTACGCC GAAGAGGCGG GCATCAAGTC CGCCACCTTC
CAGGTGGACG CCCCCTACGC TTACGGCCGA CTGTCCGTGG AAGGCGGCAC CCACCGTCTG
GTGCGCATCT CCCCGTTCGA CAACCAGGGT CGCCGCCAGA CCAGCTTCGC CGCCGTGGAA
GTGGTGCCGC TGGTCGAGGC CACCGATCAC ATCGACATTC CGGATACGGA CATCCGCGTG
GACACCTACT GCTCCTCCGG CCCCGGCGGC CAGGGCGTGA ACACCACGTA CTCGGCCGTG
CGCATCACCC ACCTTCCCAC CGGCATCGTG GTGACCATGC AGGATGAGCG TTCGCAGATT
CAGAACCGCG CCTCCGCCAT GGCCGTGCTC CAGTCCCGAC TGCTCGTGCT GCGCCACGAG
GAGGAGGCCA AGAAGAAGAA GGAGCTCGCC GGCGATATCA AGGCCAGCTG GGGCGATCAG
ATGCGCTCCT ACGTGCTGCA CCCCTACCAG ATGGTCAAGG ATTTGCGCAC CGGCTACGAA
ACCAGCCAGA CCCAGGCCGT GTTCGACGGC GACATCAACG CGTTCATCGA GGCCGGCATC
CGCTGGCGCC ACGAACAGCG CCGCGCCGCC GAAACCGAGG AGTAA
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| Protein sequence | MAEFDFTQAI GEARAKYESI AKALDVDRLK ADIKDLETQA AAPGLWDDPE NAQKITSRLS
AAESQLKRLN SASQRIDDVE TLVELGHEEG DQDSLDEAQS EIGEIQKDLD QMEIQTLLDG
EYDERSAVVT IRSGAGGVDA ADFAQMLLRM YLRYCERNGF KAKVMDTSYA EEAGIKSATF
QVDAPYAYGR LSVEGGTHRL VRISPFDNQG RRQTSFAAVE VVPLVEATDH IDIPDTDIRV
DTYCSSGPGG QGVNTTYSAV RITHLPTGIV VTMQDERSQI QNRASAMAVL QSRLLVLRHE
EEAKKKKELA GDIKASWGDQ MRSYVLHPYQ MVKDLRTGYE TSQTQAVFDG DINAFIEAGI
RWRHEQRRAA ETEE
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