| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0935 |
|---|
| Symbol | hisM6 |
|---|
| ID | 6363069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1077255 |
|---|
| End bp | 1078250 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642680103 |
|---|
| Product | amino acid ABC transporter permease |
|---|
| Protein accession | YP_001954879 |
|---|
| Protein GI | 189439798 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.38791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA AAGAAGTCGA CGGTGAGGGA GTGAACATCC CCAACCGCAT CAAGGCGCTG
CCGGTCAAGC GCCCCGGCCC GATTGTGGCC GCAGTGATCG TGGTGCTGCT CGCCGCGATG
CTCATTCAAG GCTTGATTAC CAATCCGCGA CTGGATTGGC CCACCGTCTG GAAGTACCTG
TTCAACGAGA ACGTGCTTGA AGGCATTCGC TATACCTTGG AGCTCACCGT GATCTCCATG
GTCGTGGCGA TCATCCTGTC GGTGATTCTC GCCATCATGC GCAAATCCAT CAATCCGGTG
CTGCGCGGCG TCAGCTGGTT CTTCATCTGG TTCTTCCGCG GCACGCCTGT GTACACGCAG
CTCATTTTCT GGGGTCTGTT CGCCGTGCTG ATTCCCAAGA TTAGCCTCGG CATTCCGTTC
ACCTCGGTGG AGTTCTGGAG CATCGACTCC AACGTGGTGG TCACCGCATT CAACGCCGCA
TGGATTGGTT TGGCTCTGAA CGAGGCCGCC TACCTGTCCG AAATCGTGCG TGCCGGCCTT
GAAGCCGTGG ACCCCGGCCA GACCGAGGCG GCCAAGGCAT TGGGCATGAA CCGCACGCTC
ATCATGCGCC GCATCGTGCT GCCGCAGGCT ATGCGCATCA TCATCCCGCC CACCGGCAAC
GAGACCATCG GCATGCTGAA GACCACCTCG CTGGTCACCG CCGTGCCGTT CACCCTCGAA
CTGCAGTTCG CCACCAACGC CATCGCCAAC CGTATCTACA AGCCGATTCC GCTGCTTCTC
GTGGCCTGCT TCTGGTACCT GCTGATCACC TCCATTCTGA TGGTTGTGCA GTCCCGCCTT
GAGGCGCACT TCGGCAAGGG CTTCAACGCC CGCCCGGTGG GCACCAAGGG CAAGCAGCCG
CCATACGATC CGCCGTACCC CGGCAAGTCT GACGGCGAGC CGAAGGACGA TGTGAACAAA
ATCAATCAGA CCACCTTCGC TGGGCTGAAT GCGTAA
|
|---|
| Protein sequence | MAKKEVDGEG VNIPNRIKAL PVKRPGPIVA AVIVVLLAAM LIQGLITNPR LDWPTVWKYL
FNENVLEGIR YTLELTVISM VVAIILSVIL AIMRKSINPV LRGVSWFFIW FFRGTPVYTQ
LIFWGLFAVL IPKISLGIPF TSVEFWSIDS NVVVTAFNAA WIGLALNEAA YLSEIVRAGL
EAVDPGQTEA AKALGMNRTL IMRRIVLPQA MRIIIPPTGN ETIGMLKTTS LVTAVPFTLE
LQFATNAIAN RIYKPIPLLL VACFWYLLIT SILMVVQSRL EAHFGKGFNA RPVGTKGKQP
PYDPPYPGKS DGEPKDDVNK INQTTFAGLN A
|
|---|
| |