Gene BLD_0911 details

Gene Information

• Locus tag: BLD_0911
• Symbol: recQ
• ID: 6364298
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: -
• Start bp: 1047083
• End bp: 1048948
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642680079
• Product: superfamily II DNA helicase
• Protein accession: YP_001954855
• Protein GI: 189439774
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTTGCCG GACGCGATGT CTTGGGCGTG ATGCCCACCG GCGCAGGCAA GTCCGTGTGC 
TACCAGATTC CCGCCGCGCT CAGCCCGGGT ATGACTTTGG TCATATCTCC CTTGATTTCC 
CTGATGCGCG ACCAGGTCGA TGCGCTGAAC GACCTCGGTC TGCCGGCCGC GTTCATCAAT 
ACCACTCAAA CTCCCGACGA GCAGGCGATG GTGTTCGCCC AAGCCGCCGC CGGGCAGATC 
AAACTGCTGT ACGTGGCCCC GGAACGCTTG GAAACCGGGC GATTCCGCGA CTTTGCCGCC 
CGTACGCCGA TCTCGCTGAT CGCCGTGGAC GAAGCCCACT GCGTCTCCCA GTGGGGTCAG 
GACTTCCGCT CGTCGTACTT AGGTATCGGC GATTTCATCG CCGGGCTGCC GCAGCGTCCA 
CCGGTGGGTG CGTTCACCGC CACCGCCACC GAACGGGTGC GCCGGGACAT CGTGGGACTG 
CTGGGATTGC GGAATCCGGC CGTCACCGTT ACCGGATTCG ACCGGCCGAA CCTGTATTTT 
GATGTGGTCA AACTGGAAAC CAAATACAAG GCCGCATGGG TGGCGCGGTA TGTGGCCGAC 
CATCCGGACG AATCCGGCAT CGTCTACTGC GCCACCCGCA AGACCACCGA AGCGCTCACC 
GACACGCTGA ACCAGATGGG GCATCCGGCC GTTGCCTACC ATGGCGGCAT GTCGCCGGAC 
GCGCGTGAGG CGGCCCAGCG CGACTTCATC ACCGACAAGG TGCCGGTGGT CGTGGCCACC 
AACGCTTTCG GCATGGGCAT CGATAAGTCC AACGTGCGTT ACGTCATCCA CCACAATCTG 
CCCGAATCCA TTGAGGCCTA CTATCAGGAG GCCGGCCGCG CGGGCCGTGA CGGCGAGCCC 
AGCCGATGCA CGCTGCTGTG GAATGAGTCA GACATCGTCA CCCGGCGTCG GTTGCTGGAT 
AACGATTATG AGAACGAACG ATTGACTCCC GAAGAGCAGG AAATCGTTCG CCAGTCCAAG 
CGCCGGCTGC TGGACGGTAT GGTCGGCTAC TGCCGCACCA CCGACTGCCT GCACCGGTAT 
ATGACCCGGT ATTTCGGTCA GGAATTGTCG CCGAATGCTG GTTCCACGGC GGGTGAAGAC 
ATTGCGGCGG ACTCTTCGCA GTCCGGCAAA TGCGGTGCCT GCTCGAACTG CGAAAGCACG 
TTCGAGACCA TCGACGTGAC CCGCGTGGCG CAGGCGATCA GCCGTTGCGT GCATGACGTG 
GGGCAGCGCG TCGGTTCCGG CAAGATCGTC AAGATCCTGC GCGGTTCGCG GGCACAGGAT 
CTGGCATGGC TGAACCCGGA GCGGATGCCC ACCTTCGGCA TGCTCAAGGA CGTGAACGAG 
GCTCGCGTGC GCGACGTGTT GAGCCAGATG GCCACGGACG GGTACCTGTC AATCGCCGAA 
GGGCGTATGC CAATCGTCAT GTTCGGTGCG CGGGCGGCCG AAACCGCCGC TCCCGACTTC 
CACTATGAGA TCAAACGGGT GGAACGCAAG TCGGAGGCGG CCGGTTCCGG TCGGAGCGGG 
GGAGTGGCTG ATACTGCCGA TTCCGCCAAT GTTCCCGGCG ATGCGCTGGG CTCGTATATC 
CCGGACGATG ACGAGGAATC GCTGTTCCAG AAGCTACGCG AACTGCGACG CACCATCGCC 
CAGGAAATCG GCAAGCCGCC GTACATCGTG TTCTCCGACA AGACCTTGCG CGACATGGCC 
CGCATCAAGC CGGTTACCAA CGCGCAATTT CTGGCGGTCA ACGGCGTCGG TCAACACAAG 
CTCGACCTCT ACGGCCAGCG CTTCATGCAA GCCATCGCCT CGTTCAATGC CGGGAGTGCG 
TCATAA 

 

Protein sequence

MLAGRDVLGV MPTGAGKSVC YQIPAALSPG MTLVISPLIS LMRDQVDALN DLGLPAAFIN 
TTQTPDEQAM VFAQAAAGQI KLLYVAPERL ETGRFRDFAA RTPISLIAVD EAHCVSQWGQ 
DFRSSYLGIG DFIAGLPQRP PVGAFTATAT ERVRRDIVGL LGLRNPAVTV TGFDRPNLYF 
DVVKLETKYK AAWVARYVAD HPDESGIVYC ATRKTTEALT DTLNQMGHPA VAYHGGMSPD 
AREAAQRDFI TDKVPVVVAT NAFGMGIDKS NVRYVIHHNL PESIEAYYQE AGRAGRDGEP 
SRCTLLWNES DIVTRRRLLD NDYENERLTP EEQEIVRQSK RRLLDGMVGY CRTTDCLHRY 
MTRYFGQELS PNAGSTAGED IAADSSQSGK CGACSNCEST FETIDVTRVA QAISRCVHDV 
GQRVGSGKIV KILRGSRAQD LAWLNPERMP TFGMLKDVNE ARVRDVLSQM ATDGYLSIAE 
GRMPIVMFGA RAAETAAPDF HYEIKRVERK SEAAGSGRSG GVADTADSAN VPGDALGSYI 
PDDDEESLFQ KLRELRRTIA QEIGKPPYIV FSDKTLRDMA RIKPVTNAQF LAVNGVGQHK 
LDLYGQRFMQ AIASFNAGSA S