| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0876 |
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| Symbol | hisM5 |
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| ID | 6362848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1004045 |
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| End bp | 1004980 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642680043 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_001954820 |
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| Protein GI | 189439739 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.022777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACCCG GCCATCCCGG CATTCAGGAA GCGAGCGACA TTCATCACAT GACCGCAGCA
CCAACCGAAA CCAGGCAGCA CAATGCCCCT GACGGACACG AGGTAAGTCA GGTCGAGCTC
GAACGACGCC AATATCGTGT TCATCAGCAA ATTCAATCGA CGATTACCAG TCTGATCAGC
ACCATTGTGT TCGTGGTGGT CATCGTCATC GGCTTGAAGC TCTCCCCCGG CTGGCCACGA
GTCAAGGAGA CCTTCTTCTC CGGCGAATAC TTCGTCAAAT CGTTTCCCCA TGTGCTTGAC
GGCCTATGGC TCAACATCCG CGTTCTGCTC GTCGCAGTGG TCGGCGTGGC GATTCTGAGC
ACGCTGATCG CGCTGGTGCG CACCAGCCGC TCCCCTATTC TGTTCCCGCT GCGTATCCTG
GCATTGATCT ACACGACTGT GATGCGCGGC GTGCCTATTA TCGTCGTGCT GTATCTAATC
GGTTTCGGCA TTCCCGGCCT AGGCTTGTTC GGCCGTATCG ATCCCTCGGT ACTCGGCACC
ATTGCAGTGG TAATGGGATA CAGCGCCTAC GTCTCCGAGG TGCTGCGTGC CGGTTTTAAC
GACGTACATC CTTCTCAGCG AGCCTCGGCC CGCTCGTTGG GCCTGACCTC CGGCCAGACG
ACCCGACTGA TCGTCATTCC TCAGGCATTG CGCAAAGTGG CGCCCGCACT GATGAATGAC
TTCATCTCCA TGCAAAAGGA CGTCGGCCTG ATTTCCGTGC TGGGTGCGGT GGATGCCGTG
CGCGCCGCAC AGATCGACGT GGCCAGCACC TACAACTTCA CGCCGTATGT GGTCGCCAGC
CTGCTGTTCA TCCTGATGAG CGTGCCGTTC ATCCTGCTGA ACGACTGGTA CACGGAACGT
CTGCGTAAGC GCGAACTCAG CGGAGGAACG GTATGA
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| Protein sequence | MAPGHPGIQE ASDIHHMTAA PTETRQHNAP DGHEVSQVEL ERRQYRVHQQ IQSTITSLIS
TIVFVVVIVI GLKLSPGWPR VKETFFSGEY FVKSFPHVLD GLWLNIRVLL VAVVGVAILS
TLIALVRTSR SPILFPLRIL ALIYTTVMRG VPIIVVLYLI GFGIPGLGLF GRIDPSVLGT
IAVVMGYSAY VSEVLRAGFN DVHPSQRASA RSLGLTSGQT TRLIVIPQAL RKVAPALMND
FISMQKDVGL ISVLGAVDAV RAAQIDVAST YNFTPYVVAS LLFILMSVPF ILLNDWYTER
LRKRELSGGT V
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