| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0871 |
|---|
| Symbol | dinP1 |
|---|
| ID | 6362843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 997709 |
|---|
| End bp | 999298 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642680038 |
|---|
| Product | Nucleotidyltransferase/DNA polymerase for DNA repair |
|---|
| Protein accession | YP_001954815 |
|---|
| Protein GI | 189439734 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCG GAACGGTATC GACGCAACGC GAGCATACCT ATATTGCCAT TGATCTCAAG
TCCTTCTATG CCTCGGTGGA GTGCGTGGCG CGCGGACTCG ACCCGTTGAC CACGCATCTG
GTGGTGGCCG ATGAAACCCG CACCGATAAG ACAATATGTT TGGCGGTCTC ACCCTCGCTG
AAGAACTATG GCATTCCCGG TCGTGCGCGG CTATTCGAGG TAAAACAGCG CCTGAATGGA
GTCAACATCG AGCGCGCGGT CCATGCTCCC GGCGGCCGAT TAATCGGGGA GTCCTGCGAT
GCATGCGACC TGGAACGCTC GCCGGGACTC AAAGCCTCGA TGGTCATCGC CAAACCTCGC
ATGGCGCACT ATCTGGAAAT CAGCGGGCAA ATATATGGCA TCTACCTCAA ATACGCCGCA
CCCGAGCACA TCCATGTCTA CTCGATTGAC GAGGTGTTCA TCGACGCCAC GCCATATCTG
CGCTCGCTGG GTATGGGGCC GCATGCGATG GCGCGAACCA TCGTGCGCGA AATCCTCACC
AAAACCGGCA TCACCGCCAC TGCCGGCATC GGCTCCAACA TGTATCTGGC CAAAGTCGCC
ATGGATATCG TCGCCAAGCA CATGCCCGCC GACAAGGACG GCGTGCGCGT GGCCGAACTG
AATGAAATGT CATATCGTCG GCTGCTTTGG GATCATCGTC CGCTCACCGA TTTTTGGCGG
GTTGGGCGCG GCTATGCCAA GAAGCTCGAG CATGCCGGAC TGATGACCAT GGGCGATATC
GCCCGATGCT CGGTGGGTCG TGCTTCGGAT TACTACAACG AAGACCTGCT GTATCGCATG
TTCGGTGTCA ATGCCGAACT GCTCATCGAC CATGCGTGGG GCTGGGAGCC GTGCGAAATC
GCAGATATCC GATCCTATGA GCCAGGTGCG CACAGCATTA GCAGTGGGCA GGTGCTCACC
GGCCCCGCCG ACTATGCCAC GGCCCGGCTG ATCACCAAGG AGATGGCCGA TGCGCTGGCC
CTCGATCTGG TCGATAAAAG CGTGCTGACG AACCGACTGA CGCTCGCCGT CGGCTATGAC
ATCGGCAGTC TTGATTCGTC AAAGCTCGAT TCGTGCGCTG ATTATGCGAT GAAACGTGCC
GCTGAGCGGG CAGCGAAAAG CTATCAAGGG CCGGTGACCA TCGACCGATT TGGGCGCAAG
GTGCCCAAGA GCGCGGTCGG GTCGATTGGT TTGGGTGATT TCACCTCGTC GTCGGCACGT
ATTCGTGAGG CCATGACGAT GTTGTACGAG CGCATTGTGG ATTCACGCTT GCTTGTGAGG
CGGTTGACCG TCATCGCCGA TGATGTGGCC ACTCCGGAGG AGCTGGCCGC CGGCAAACGC
TATGAACAGC TCGACTTGTT CGGTGATGAC GAGGCCCAAT CGTATGGATC CGATTCCACC
AGCGAAAAAG ATGGAGAGCA TGATATCCAG CGTGCGCTGC TGGATGTGAA ACGTAAATTC
GGCCGCAACG CCGTCATCAA AGCCATGGAT ATGGAAGACG GCGCCACCGG TCAGGACCGC
AACCGTCAGA TCGGAGGCCA TCGCGCATGA
|
|---|
| Protein sequence | MGSGTVSTQR EHTYIAIDLK SFYASVECVA RGLDPLTTHL VVADETRTDK TICLAVSPSL
KNYGIPGRAR LFEVKQRLNG VNIERAVHAP GGRLIGESCD ACDLERSPGL KASMVIAKPR
MAHYLEISGQ IYGIYLKYAA PEHIHVYSID EVFIDATPYL RSLGMGPHAM ARTIVREILT
KTGITATAGI GSNMYLAKVA MDIVAKHMPA DKDGVRVAEL NEMSYRRLLW DHRPLTDFWR
VGRGYAKKLE HAGLMTMGDI ARCSVGRASD YYNEDLLYRM FGVNAELLID HAWGWEPCEI
ADIRSYEPGA HSISSGQVLT GPADYATARL ITKEMADALA LDLVDKSVLT NRLTLAVGYD
IGSLDSSKLD SCADYAMKRA AERAAKSYQG PVTIDRFGRK VPKSAVGSIG LGDFTSSSAR
IREAMTMLYE RIVDSRLLVR RLTVIADDVA TPEELAAGKR YEQLDLFGDD EAQSYGSDST
SEKDGEHDIQ RALLDVKRKF GRNAVIKAMD MEDGATGQDR NRQIGGHRA
|
|---|
| |