Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0812 |
Symbol | argF |
ID | 6362958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 932002 |
End bp | 932967 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642679978 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_001954756 |
Protein GI | 189439675 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.347749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCCAG AACTTCGCCA CATGCTGCGT GACGACGACC TCAACCATGA GGAACAGAAG CAGGTGCTCG AACTTGCCAT CAAGTTCCAC CACGACCGCT TCTACAAGCA GCCGTTCGCC GGTCCGCAGG CCGTCGCCGT ACTGTTCGAC AAGCCCTCCA CCCGCACCCG TTCCAGCTTC TCCATCGGCG TTGCCGAGCT TGGCGGCTAC CCGCTGGTCA TCGACAAGTC CGGCTCCCAG CTGGGCCGTG GCGAGCCCGT GGCCGATACC GCTCGTGTGC TCAACCGCAT GGCTTACGGT GTGGTGTGGC GCACCTTCGG CCAGGGCCGC GTCGAAGAAA TGGCCAAGTA CTCCACCCAT CCGGTGGTCA ACGCCCTGAC CGATGACTTC CATCCCTGCC AGATTCTCGC CGACTTCCAG ACCATCGCCG AGCACCGAGG CGGCGTCGAC AACCTGAAGA ACCAGACCAT CGCCTACCTC GGTGACGCGG CCAACAACAT GGCCAACTCC TACCTGCTCG GCGGTGCCGT GGCCGGCATG GACGTGCGCG TGGCCGGCCC CTACGGCTAC CTGCCCCGCC CGGACATCGT GGCCGACGCC AAGCGCGTCG CGGCCGAGAC CGGCGGCTCC ATCCTGGTCA CCACCGATGC CAAGGAAGCG GTGAAGGACG CCGATTGCGT GTTCACCGAC ACCTGGGTCT CCATGGGCGA GGAGGCCGAA TACGCCATCC GTTCCAAGCC GTTCTGGGAT TACCAGGTCA ACACCGAACT TATGGCATTG GCCAAGCCGG ATGCGCTCTT CCAGCACTGT CTGCCCGCCT ACCGCGGCAA GGAAGTCACC GCTGAAGTGA TCGACGGCCC GCAGTCCGTG GTGTGGGATG AGGCCGAGAA CCGTCTGCAC GCACAGAAAG CGTTGCTGAC TTGGTTGACC GGCAAGGCCC GTGGAGACGA AAGCCTGCTC GCATGA
|
Protein sequence | MTPELRHMLR DDDLNHEEQK QVLELAIKFH HDRFYKQPFA GPQAVAVLFD KPSTRTRSSF SIGVAELGGY PLVIDKSGSQ LGRGEPVADT ARVLNRMAYG VVWRTFGQGR VEEMAKYSTH PVVNALTDDF HPCQILADFQ TIAEHRGGVD NLKNQTIAYL GDAANNMANS YLLGGAVAGM DVRVAGPYGY LPRPDIVADA KRVAAETGGS ILVTTDAKEA VKDADCVFTD TWVSMGEEAE YAIRSKPFWD YQVNTELMAL AKPDALFQHC LPAYRGKEVT AEVIDGPQSV VWDEAENRLH AQKALLTWLT GKARGDESLL A
|
| |