Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0767 |
Symbol | |
ID | 6362697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 881325 |
End bp | 882269 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642679932 |
Product | hemolysin III-like membrane protein |
Protein accession | YP_001954711 |
Protein GI | 189439630 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00245971 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCAA CAACCGGCGA CTCGGAAAAG ACGATGCATC ACGACGCTCA TAACAGCGCG ACGATTGCAG AGGATGCCAC CATCGCATCC AAGCGTCAGG CGGCTATCGA GGCGCGCGAA CAGGCGTTGC AGGCCAAGGC TGATGCCGTA CGGGCCAAGG CCCAGTTCAA GGCCGAGGCC ATTCGAGCCA AAGCCGAGGA GAAGGCCCGG CACAAGCTCG CCAAAGCGGA GAACCGTGCG CTGAAAATCG AGGGCATTGC CCCTGCGGAA GTGGAACGCA AGATTCGTCT CGACGTGCAC GGACGGCCAA AGCCGTTGAT GCGCGGCTGG ATTCACGCGA TTGCCGCTCC CCTGTCATTG GCGGCAGGCA TCGTGCTTAT ATGCCTGGCA CATGGCGCGA GTCTGAAGTG GGCGTGTGCC GTGTTCATGA CAGCGTCGCT GATTCTGTTC ACCAATTCGG CCTGCTACCA TCTGGGCGAT TGGAGCCCGC GCGTCACCGA TGTGCTGCGG CGTATCGATC ATGTCAACAT CTTCCTGCTC ATTGCCGGCA CGTATACCCC GGTTTCGTTT GCGCTGGAAC CGTTCTGGCG CAATGTGATC ATCATATCGA TGTGGGCGTG CACGGCCATC GCCATCGTGA TTCATGTGAT CTGGATCAAT GCACCACGCT GGCTGTATAC GGTGGTGTAC ATCATCTTCG GCATCTACGG CCTGGCTTAT ATGGTGATGT TCTGGAATTC GCCGTATGCG GGGCCAGCCG TGGTGGTGCT GCTGTGCGCC GGCGGTGCCT GCTACATCCT CGGCGCCATC GTCTACGCCT TGCGCAAGCC CGACCCTTGG CCTCGCGTCT TCGGATTCCA TGAGATTTTC CACTGCGGAA CGGTGGCCGG ATATGCCTGC CATATGGTGG CCATCTACAT GGTGATCGTC TCGCTGTGGC AATAA
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Protein sequence | MASTTGDSEK TMHHDAHNSA TIAEDATIAS KRQAAIEARE QALQAKADAV RAKAQFKAEA IRAKAEEKAR HKLAKAENRA LKIEGIAPAE VERKIRLDVH GRPKPLMRGW IHAIAAPLSL AAGIVLICLA HGASLKWACA VFMTASLILF TNSACYHLGD WSPRVTDVLR RIDHVNIFLL IAGTYTPVSF ALEPFWRNVI IISMWACTAI AIVIHVIWIN APRWLYTVVY IIFGIYGLAY MVMFWNSPYA GPAVVVLLCA GGACYILGAI VYALRKPDPW PRVFGFHEIF HCGTVAGYAC HMVAIYMVIV SLWQ
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