Gene BLD_0767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0767 
Symbol 
ID6362697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp881325 
End bp882269 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content59% 
IMG OID642679932 
Producthemolysin III-like membrane protein 
Protein accessionYP_001954711 
Protein GI189439630 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00245971 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAA CAACCGGCGA CTCGGAAAAG ACGATGCATC ACGACGCTCA TAACAGCGCG 
ACGATTGCAG AGGATGCCAC CATCGCATCC AAGCGTCAGG CGGCTATCGA GGCGCGCGAA
CAGGCGTTGC AGGCCAAGGC TGATGCCGTA CGGGCCAAGG CCCAGTTCAA GGCCGAGGCC
ATTCGAGCCA AAGCCGAGGA GAAGGCCCGG CACAAGCTCG CCAAAGCGGA GAACCGTGCG
CTGAAAATCG AGGGCATTGC CCCTGCGGAA GTGGAACGCA AGATTCGTCT CGACGTGCAC
GGACGGCCAA AGCCGTTGAT GCGCGGCTGG ATTCACGCGA TTGCCGCTCC CCTGTCATTG
GCGGCAGGCA TCGTGCTTAT ATGCCTGGCA CATGGCGCGA GTCTGAAGTG GGCGTGTGCC
GTGTTCATGA CAGCGTCGCT GATTCTGTTC ACCAATTCGG CCTGCTACCA TCTGGGCGAT
TGGAGCCCGC GCGTCACCGA TGTGCTGCGG CGTATCGATC ATGTCAACAT CTTCCTGCTC
ATTGCCGGCA CGTATACCCC GGTTTCGTTT GCGCTGGAAC CGTTCTGGCG CAATGTGATC
ATCATATCGA TGTGGGCGTG CACGGCCATC GCCATCGTGA TTCATGTGAT CTGGATCAAT
GCACCACGCT GGCTGTATAC GGTGGTGTAC ATCATCTTCG GCATCTACGG CCTGGCTTAT
ATGGTGATGT TCTGGAATTC GCCGTATGCG GGGCCAGCCG TGGTGGTGCT GCTGTGCGCC
GGCGGTGCCT GCTACATCCT CGGCGCCATC GTCTACGCCT TGCGCAAGCC CGACCCTTGG
CCTCGCGTCT TCGGATTCCA TGAGATTTTC CACTGCGGAA CGGTGGCCGG ATATGCCTGC
CATATGGTGG CCATCTACAT GGTGATCGTC TCGCTGTGGC AATAA
 
Protein sequence
MASTTGDSEK TMHHDAHNSA TIAEDATIAS KRQAAIEARE QALQAKADAV RAKAQFKAEA 
IRAKAEEKAR HKLAKAENRA LKIEGIAPAE VERKIRLDVH GRPKPLMRGW IHAIAAPLSL
AAGIVLICLA HGASLKWACA VFMTASLILF TNSACYHLGD WSPRVTDVLR RIDHVNIFLL
IAGTYTPVSF ALEPFWRNVI IISMWACTAI AIVIHVIWIN APRWLYTVVY IIFGIYGLAY
MVMFWNSPYA GPAVVVLLCA GGACYILGAI VYALRKPDPW PRVFGFHEIF HCGTVAGYAC
HMVAIYMVIV SLWQ