Gene BLD_0750 details

Gene Information

• Locus tag: BLD_0750
• Symbol: ispF
• ID: 6362777
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: -
• Start bp: 861641
• End bp: 862150
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642679915
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001954694
• Protein GI: 189439613
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.109337
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGATAG GGCAAGGTTT TGACGCTCAC CGTTTTGCGC CTGCTGGCTC AGGCCGTGAA 
CTGTGGATTG CCGGGCTCTA CTGGCCGGTG CCTGATTCAT GCAGCGAGGC CGATGCCGCC 
AAATACGAGG GGATCGAAGG CGATTCCGAT GGCGATGTGG CCGCGCACGC TCTGATTGAC 
GCGTTGCTTG CCGCCGCCCG ATTGGGAGAC ATTGGTTCAC TGTTCGGTGT CGGTGCGGAC 
GCGCATGGTG CCGGAATGCA TGGCATCGAT ATGTTGCAAG AAGTTGTGGC GCATCTGGCA 
TCCAACGGGT ATACGCCGGC ATCGGCCTCG GTGGCGATCA TCGGCAACCG CCCGAAAATC 
GGCACACGCC GTGCTGAAGC CGAAGCCGCC CTGTCTGCGG CGGTTGGTTG CCCGGTATCG 
GTTACTGCCA CCACCACCGA CCATATGGGA TTCACTGGCC GCGGCGAAGG CATCGCCGCC 
ATCGCCAATG CCTTGGTGGA GAAGATATAA 

 

Protein sequence

MLIGQGFDAH RFAPAGSGRE LWIAGLYWPV PDSCSEADAA KYEGIEGDSD GDVAAHALID 
ALLAAARLGD IGSLFGVGAD AHGAGMHGID MLQEVVAHLA SNGYTPASAS VAIIGNRPKI 
GTRRAEAEAA LSAAVGCPVS VTATTTDHMG FTGRGEGIAA IANALVEKI