| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0729 |
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| Symbol | lacZ1 |
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| ID | 6363268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 835142 |
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| End bp | 838213 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642679892 |
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| Product | beta-galactosidase |
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| Protein accession | YP_001954673 |
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| Protein GI | 189439592 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0768617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACG TCACACATGT CGATCGCGCA TCGCAGGCTT GGCTGACCGA CCCGACGGTG
TTCGAGGTGA ACCGGACTCC GGCCCATTCC AGCCACAAGT GGTACGCCCG CGACCCCCAG
AGCGGACAAT GGTCCGATCT CAAGCAGAGC CTTGACGGCG AGTGGCGGGT CGAGGTCGTT
CAGGCCGCCG ACATCAACCT CGAAGAGGAA CCCGCGACGG CCGAGTCGTT CGACGACTCC
TCGTTCGAGC GTATCCAGGT TCCGGGCCAC CTGCAGACGG CCGGTCTGAT GAACCACAAG
TACGTGAACG TCCAGTATCC GTGGGACGGC CACGAGAACC CGTTGGAACC GAACATCCCG
GAGAACAATC ACGTCGCGCT CTACCGCAGG AAGTTCACCG TCTCCGCCCC CGTGGCAAAC
GCCAAGCAGG CCGGCGGATC GGTGTCGATC GTGTTCCACG GCATGGCCAC GGCGATCTAC
GTGTGGGTCA ACGGCGCGTT CGTCGGCTAT GGCGAGGACG GCTTCACGCC CAATGAGTTC
GACATCACCG AACTGCTGCA CGACGGGGAG AACGTCGTGG CCGTCGCCTG CTACGAATAC
TCCAGCGCCT CCTGGCTTGA GGATCAGGAC TTCTGGCGTC TGCACGGCCT GTTCCGCTCC
GTCGAACTCG CCGCCCGCCC GCATGTGCAC ATCGAGAACA CGCAGATCGA AGCCGATTGG
GATCCCGAGG CCGGCACCGC CTCCCTCGAT GCCGCGCTGA CCGTGCTCAA CGCGGCCGAC
GCGGCCACGG TCCGCGCGAC CCTGAAGGAC GCCGACGGCA ACACGGTGTG GCAGACGACG
GGCGACGCGG AGGCGCAGAC CGCGATCTCC AGCGGGCCGC TGCAGGGCAT CGCCCCTTGG
AGCGCCGAAA GCCCGACGCT GTACGAGCTT GACGTCGACG TCATCGACCA GGCGGGCGAC
GTCATCGAAT GCACGTCCCA GAAGGTCGGT TTCCGCCGCT TCCGCATCGA GGACGGCATC
CTGACCATCA ACGGCAAGCG CATCGTGTTC AAGGGCGCCG ACCGCCACGA GTTCGACGCC
GAACGGGGCC GCGCCATCAC CGAGCAGGAC ATGATCGATG ACGTGGTCTT CTGCAAGCGC
CACAACATCA ACTCCATCCG CACCTCGCAC TACCCGAACC AGGAACGCTG GTACGAACTG
TGCGACGAGT ACGGCATCTA CCTGATCGAC GAGACCAACC TCGAAGCCCA CGGCAGCTGG
TCCCTGCCCG GAGACGTCCT CACCGAGGAC ACCATCGTGC CGGGTAGCAA GCGCGAATGG
GAAGGCGCCT GCGTCGACCG CGTCAACAGC ATGATGCGCC GTGACTACAA CCACCCGAGC
GTGCTGATCT GGTCGCTGGG CAACGAATCC TACGTGGGCG ACGTGTTCCG CGCCATGTAC
AAGCACGTGC ACGACATCGA CCCGAACCGT CCGGTGCACT ACGAGGGCGT GACTCACAAC
CGTGACTACG ATGACGTCAC CGACATCGAG ACCCGTATGT ACTCGCATGC CGACGAGATC
GAGAAGTACC TGAAGGACGA CCCGAAGAAG CCGTACCTCT CCTGCGAATA CATGCACGCC
ATGGGCAACT CCGTGGGCAA CATGGACGAA TACACGGCGC TCGAACGCTA CCCGAAGTAT
CAGGGCGGCT TCATCTGGGA CTTCATCGAC CAGGCCATCT ACGCCACCCA GCCCGACGGC
ACCAGGAGCC TGCGCTACGG CGGAGACTTC GGCGACCGTC CGTCCGACTA CGAGTTCTCC
GGCGACGGCC TGCTGTTCGC CGACCGCAAG CCTTCCCCCA AGGCCCAGGA AGTCAAGCAG
CTGTACTCGA ACGTCCACAT CGACGTGACG AAGGACTCGG TGTCCGTCAA GAACGACAAC
CTGTTCACCG CCACCGGCGA CTACGTGTTC GTCCTGAGCA TTCTCGCCGA CGGCAAGCCG
GTCTGGCAGT CCACCCGGCG TTTCGACGTG CCCGCCGGTG AGACCCGCAC GTTCGATGTC
GCATGGCCGG TGGCGGCGTA CCGCGCCGAC GCCCGCGAAC TGGTGCTGCA GGTTTCGCAG
CATCTCGCCA AGGCGACCGA TTGGGCCGAG AGCGGCTACG AGCTCGCTTT CGGACAGACC
GTGGTGCCCG CGGACGCCAC CGCGACGCCC GACACGAAGC CGGCCGATGG GACCATCACC
GTGGGCCGTT GGAACGCCGG CGTGCGAGGC GCCGGACGCG AGGTCCTGCT GTCGCGCACC
CAGGGCGGCA TGGTCTCCTA CACCTTCGCC GGCAACGAGT TCGTGCTGCG CCGTCCCGCA
ATCACCACCT TCCGTCCGCT GACTGACAAC GATCGCGGCG CCGGTCATGG CTTCGAGCGC
GTCCAGTGGC TGGGCGCCGG ACGCTACGCC CGCTGCGTGG ACAACGTGCT CGAGCAGATC
GACGACAGCA CGCTCAAGGG CACGTACACG TATGAGCTCG CCACCGCGCA GCGCACCAAG
GTGACCGTCT CCTACACGGC CCACACCGAT GGCCGCGTGA ACCTGCACGT CGAATACCCT
GGAGAGCAGG GTGACCTGCC CACCATCCCG GCGTTCGGCA TCGAATGGAC GCTGCCTGTG
CAGTACACGA ACCTGAGGTT CTTCGGCACC GGCCCGGAGG AGACGTACCT GGACCGCAAA
CACGCCAAGC TCGGCGTGTG GAGCACCAAC GCTTTCGCGG ATCATGCGCC GTACCTCATG
CCGCAGGAGA CGGGCAACCA TGAGGATGTG CGTTGGGCCG AGATTACCGA CGATCACGGC
CACGGCATGC GCGTCAGCCG CGCCGATGGT GCCGCGCCGT TCGCGGTAAG CCTGTTGCCG
TACTCCAGCT TCATGCTTGA GGAGGCTCAG CACCAGGACG AGCTGCCGAA GCCGAAGCAC
ATGTTCCTGC GCGTCCTTGC CGCACAGATG GGCGTTGGCG GCGATGATTC CTGGATGTCG
CCGGTGCACC CCCAGTACCA TATCCCGGCG GACAAGCCGA TCAGCCTCGA TGTCGACCTC
GAGCTGATCT GA
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| Protein sequence | MTDVTHVDRA SQAWLTDPTV FEVNRTPAHS SHKWYARDPQ SGQWSDLKQS LDGEWRVEVV
QAADINLEEE PATAESFDDS SFERIQVPGH LQTAGLMNHK YVNVQYPWDG HENPLEPNIP
ENNHVALYRR KFTVSAPVAN AKQAGGSVSI VFHGMATAIY VWVNGAFVGY GEDGFTPNEF
DITELLHDGE NVVAVACYEY SSASWLEDQD FWRLHGLFRS VELAARPHVH IENTQIEADW
DPEAGTASLD AALTVLNAAD AATVRATLKD ADGNTVWQTT GDAEAQTAIS SGPLQGIAPW
SAESPTLYEL DVDVIDQAGD VIECTSQKVG FRRFRIEDGI LTINGKRIVF KGADRHEFDA
ERGRAITEQD MIDDVVFCKR HNINSIRTSH YPNQERWYEL CDEYGIYLID ETNLEAHGSW
SLPGDVLTED TIVPGSKREW EGACVDRVNS MMRRDYNHPS VLIWSLGNES YVGDVFRAMY
KHVHDIDPNR PVHYEGVTHN RDYDDVTDIE TRMYSHADEI EKYLKDDPKK PYLSCEYMHA
MGNSVGNMDE YTALERYPKY QGGFIWDFID QAIYATQPDG TRSLRYGGDF GDRPSDYEFS
GDGLLFADRK PSPKAQEVKQ LYSNVHIDVT KDSVSVKNDN LFTATGDYVF VLSILADGKP
VWQSTRRFDV PAGETRTFDV AWPVAAYRAD ARELVLQVSQ HLAKATDWAE SGYELAFGQT
VVPADATATP DTKPADGTIT VGRWNAGVRG AGREVLLSRT QGGMVSYTFA GNEFVLRRPA
ITTFRPLTDN DRGAGHGFER VQWLGAGRYA RCVDNVLEQI DDSTLKGTYT YELATAQRTK
VTVSYTAHTD GRVNLHVEYP GEQGDLPTIP AFGIEWTLPV QYTNLRFFGT GPEETYLDRK
HAKLGVWSTN AFADHAPYLM PQETGNHEDV RWAEITDDHG HGMRVSRADG AAPFAVSLLP
YSSFMLEEAQ HQDELPKPKH MFLRVLAAQM GVGGDDSWMS PVHPQYHIPA DKPISLDVDL
ELI
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