| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0692 |
|---|
| Symbol | pflA |
|---|
| ID | 6363231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 792101 |
|---|
| End bp | 792982 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642679852 |
|---|
| Product | pyruvate-formate lyase-activating enzyme |
|---|
| Protein accession | YP_001954636 |
|---|
| Protein GI | 189439555 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.104164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAA CACCCACGTT CCGCACCACG ACCAGGCATA TGCTCAAGGA ATCGAAGACC
TATGCCTCGC AGACTTTGAT GGGTGGCCTT TCCGGCTTTG AATCCCCAAT CGGACTCGAC
CGACGTGACC GCCTTTCCGC CCTGAAATCC GGTGATATCG GCTTCGTCCA CTCTTGGGAC
ATCAACACCT CCGTGGATGG ACCGGGCACC CGCATGACCG TGTTCATGTC CGGCTGCCCG
CTGCGCTGCC AGTACTGCCA GAACCCGGAC ACTTGGAAGA TGCGCGACGG CAAGCCCGTC
TACCTTGACG CCATGATCAA GAAGGTCGAT CGTTACAAGG ACCTGTTCAA GGCCACGCAT
GGCGGTATCA CCTTCTCCGG CGGCGAATCC ATGATGCAGC CCGCCTTCGT CTCGCGTGTG
TTCCATGCCG CCAAGGAGAT GGGCGTGCAC ACCTGCCTCG ATACGTCCGG CTTCCTCAAC
ACGAATTACA CCGACGAGAT GCTCGAGGAC ATCGACCTGT GTCTGCTCGA CGTCAAATCC
GGCGACGAGG AGACCTATCA CAAGGTCACC GGCGGCACCT TGCAGCCCAC CATCGATTTT
GGCCAGCGAC TGGCCAAGGC CGGCAAGAAG ATCTGGGTGC GATTTGTGCT CGTGCCGGGC
CTGACCGACT CCGAAGAGAA CGTCGAAAAC GTGGCGAAGA TCTGCGAGTC CTTCGGTGAT
GCCGTCGAAC ACATCGACGT GCTGGGATTC CACCAGCTTG GCCGCCCGAA GTGGCACGAA
CTGCGTATCC CATACCCGCT GGAGAACCAG AAGGGACCCA ACGCCGCCAC CCGCGAACGG
GTGACCAACC AGTTCAAGGA CCACGGCTTC ACCGTGTATT AA
|
|---|
| Protein sequence | MPATPTFRTT TRHMLKESKT YASQTLMGGL SGFESPIGLD RRDRLSALKS GDIGFVHSWD
INTSVDGPGT RMTVFMSGCP LRCQYCQNPD TWKMRDGKPV YLDAMIKKVD RYKDLFKATH
GGITFSGGES MMQPAFVSRV FHAAKEMGVH TCLDTSGFLN TNYTDEMLED IDLCLLDVKS
GDEETYHKVT GGTLQPTIDF GQRLAKAGKK IWVRFVLVPG LTDSEENVEN VAKICESFGD
AVEHIDVLGF HQLGRPKWHE LRIPYPLENQ KGPNAATRER VTNQFKDHGF TVY
|
|---|
| |