| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0686 |
|---|
| Symbol | clpP2 |
|---|
| ID | 6364212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 785792 |
|---|
| End bp | 786415 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642679846 |
|---|
| Product | ATP-dependent Clp proteases Protease subunit |
|---|
| Protein accession | YP_001954630 |
|---|
| Protein GI | 189439549 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATA CCTTTGCGAC CTTGCCGGTC ATGGCGGGCG ATGACGTCCC GGCCGGCCCC
GTCGACCCGA TTTTCAACCG TCTGCTCAAA GACCGCATCA TCTGGATGGG TGAAGAGGTC
AAGGACGATA TGGCCAACCG CATCTGCGCT CAGCTGCTGA TGCTGGCCGC CGAAGACCCG
AAGAAGGACA TCTGGCTGTA CATCAACTCG CCGGGCGGCT CCATCACCGC CGGCATGGCC
ATCTACGACA CCATGCAGCT CATCGAGCCT GACGTGGCGA CCGTGGGCCT GGGCATGTGT
GCTTCCATGG GCCAGTTCCT GCTGAGCTCC GGCACCAAGG GCAAGCGTTA CCTGACCTCG
CACGCCCGTG TGCTCATGCA CCAGCCTTCC GGCGGCATCG GCGGCACCGC CACTGACGTG
CGCATCAACG CCGAGCTCAT CATGGACATG AAGAAGACCA TGAGCGAGCT GACCGCTGAG
CAGACCGGCC ACACCCTCGA GGAAATCTAC CGCGACAACG AATACGACCA CTGGTTCACC
GCCCAGGAAG CCCTCGACTA TGGCTTCGTG GACAAGCTCG TGACCACGCC GGACACCATC
GGCAACAACC AGCAGGGGGA GTGA
|
|---|
| Protein sequence | MSNTFATLPV MAGDDVPAGP VDPIFNRLLK DRIIWMGEEV KDDMANRICA QLLMLAAEDP
KKDIWLYINS PGGSITAGMA IYDTMQLIEP DVATVGLGMC ASMGQFLLSS GTKGKRYLTS
HARVLMHQPS GGIGGTATDV RINAELIMDM KKTMSELTAE QTGHTLEEIY RDNEYDHWFT
AQEALDYGFV DKLVTTPDTI GNNQQGE
|
|---|
| |