| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0679 |
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| Symbol | sdhA |
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| ID | 6364016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 776749 |
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| End bp | 778614 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679837 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_001954623 |
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| Protein GI | 189439542 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.918858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCGA AACGTTTGGA AGATATGTAT GATGCGGTGA TCGTCGGCGC CGGAGCGGCC
GGCCTGTCGG CGGCGTTGGG ACTGCTGCGC TCCCCCGAGA TCACCGAGCT CAAGGAACAA
GGCGTGGACC CGAAGATCCT CGTGGTCTCC AAACTGCAGC CGCTGCGTTC GCACACCGGT
TCAGCCGAGG GCGGCATCGC CGCGAGCCTG GGCAATGTGG AGTCCGATGA CTGGCACTGG
CATTACTACG ACACCATCAA GGGCGGCGAC TGGCTGGTGG ACCAGGATGC GGCCAAACTG
CTCGCCGAAT ACGCGCCGCA GACCGTGATC AACCTGGAGC GTCAGGGCGT GGCCTTCTCC
CGTACCGAGG ACGGGCATAT CGCCCAGCGC CGGTTCGGCG GCCACACGCG CGAGTTCGGC
GGCGCCCCGG TCAAGCGCGC CGCCTATGCG GCCGACCGCA TCGGCCACCA GATTCTGCAC
GCCTTGTGGC AGCAGTGCGT GGCCGCCGGC GTCGAGTTCG CCGAGGAATG GTATGTGACC
GACCTGGTGC TCGCCGACGA CGGCAAGCAG GCGGCCGGCA TCGTGGCCTT TGACACGCAT
TCGGGCAAGA TTCAGGCCAT CCACGCGCGC AACGTGCTGC TTGCCACCGG TGGCGCGGGC
CGACTGTTCC ACACCACGTC AAATTCCTGG GATCTGACCG GCGACGGCAT GGGCTTGACC
TTGGCCGCCG GTCTGCAGCT GGAGGACATC GAATTTGTGC AGTTCCACCC CACCGGGCTC
GCGCACACCG GCATCCTGCT GTCCGAGGCG GCCCGCGCCG AGGGCGGCAT TCTGAGGAAC
GCCGACGGTG AGCCGTTTAT GGAACGCTAC GCTCCGGAGC ATAAGGATCT GGCCGCACGA
GACGTGGTCT CCCGCTCCAT CATGGCGGAG ATCGACGCCG GTCGCGGCGT CGCCGACCCG
AAGGACCCGG ATGGTCCGAA GGACTGCGTC TGGCTGGATA TGACCGGCAT CGACCCCGAA
CGTATGAAGG AAGTGCTGCC GCAGGTGGTC GAAACCATCG AGCAGTACGC GAACCTCGAT
CCGGCCAAGG ACCTAGTACC CATCAAGCCC ACTGCACACT ACACGATGGG CGGCATCCCC
ATCACCACCG ACGGCGAGGT GTACCGTTGG GCCGACGGTG CCGTGCAGGT AGTCGATGGA
CTGTTCGCCG CTGGCGAATG CTCTTGTGTC TCCGTACATG GTGCGAATCG TCTGGGCGGC
AATTCTCTGC TCGACGCCTG CCTGTTCGGC ACACGCGCTG GTCAGACGAT GGCCGCACGC
ATCGCCGAGA ACCCGGTTGA CTCCCCCATG GCCGATGATT CGGCCGATGA CATGCTGACC
GATGCCGCCG ATCAGGCTGC CGATTCTCGC AAAGCGGAGC TTGACGAACT GCTCGCCGGG
CCAATAGATG ATTCAGACGA TGGAGTGCCC ACCGCCAATC CTTATCAGCT CATGGCCCAA
CTCGGATCAG TGATGGAGCA GGCTCTGGCC GTACGTTGCA CCGCTCAGAC CATCGATACG
GCGTTGACCC AGATCAACGG TGACATCACA CCGGTTGCCG ATACCTTGCG GGCCCATGAC
AAGACCGCCG CTTTCAATCA GGAGGTCACC GCCATCTGGG AAGTCCGTCA TCTGATCGAA
CTGGCCGAGG TCATGCTGCA CGCTTCCGAA TCCCGTCAGG AATCTCGCGG ATCCATGCAA
CGCCTTGATT TCCCCGAACG CGACGATGAG CATTTCCTTG CTCACTCGAT GGTCGCCGAT
GATGGTTCGG TAAGTTTCAA GCCGGTGCAC ATCACCGACT ATCCGCCCAA GAAGCGCGAG
TACTGA
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| Protein sequence | MSPKRLEDMY DAVIVGAGAA GLSAALGLLR SPEITELKEQ GVDPKILVVS KLQPLRSHTG
SAEGGIAASL GNVESDDWHW HYYDTIKGGD WLVDQDAAKL LAEYAPQTVI NLERQGVAFS
RTEDGHIAQR RFGGHTREFG GAPVKRAAYA ADRIGHQILH ALWQQCVAAG VEFAEEWYVT
DLVLADDGKQ AAGIVAFDTH SGKIQAIHAR NVLLATGGAG RLFHTTSNSW DLTGDGMGLT
LAAGLQLEDI EFVQFHPTGL AHTGILLSEA ARAEGGILRN ADGEPFMERY APEHKDLAAR
DVVSRSIMAE IDAGRGVADP KDPDGPKDCV WLDMTGIDPE RMKEVLPQVV ETIEQYANLD
PAKDLVPIKP TAHYTMGGIP ITTDGEVYRW ADGAVQVVDG LFAAGECSCV SVHGANRLGG
NSLLDACLFG TRAGQTMAAR IAENPVDSPM ADDSADDMLT DAADQAADSR KAELDELLAG
PIDDSDDGVP TANPYQLMAQ LGSVMEQALA VRCTAQTIDT ALTQINGDIT PVADTLRAHD
KTAAFNQEVT AIWEVRHLIE LAEVMLHASE SRQESRGSMQ RLDFPERDDE HFLAHSMVAD
DGSVSFKPVH ITDYPPKKRE Y
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